RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 H0YL77 283 aa17.17■□□□□ 0.34
TOP3A-219ENST00000584887 CYB5R3P00387 301 aaPredicted RBP17.17■□□□□ 0.34
TOP3A-219ENST00000584887 HLA-DQA2P01906 255 aa17.17■□□□□ 0.34
TOP3A-219ENST00000584887 HIST1H1CP16403 213 aaKnown RBP17.17■□□□□ 0.34
TOP3A-219ENST00000584887 ZNF12P17014 697 aa17.17■□□□□ 0.34
TOP3A-219ENST00000584887 SRP9P49458 86 aaKnown RBP17.17■□□□□ 0.34
TOP3A-219ENST00000584887 UBA52P62987 128 aaKnown RBP17.17■□□□□ 0.34
TOP3A-219ENST00000584887 RFX4Q33E94 735 aa17.17■□□□□ 0.34
TOP3A-219ENST00000584887 MOGAT3Q86VF5 341 aa17.17■□□□□ 0.34
TOP3A-219ENST00000584887 OR6V1Q8N148 313 aa17.17■□□□□ 0.34
TOP3A-219ENST00000584887 OR2AJ1Q8NGZ0 328 aa17.17■□□□□ 0.34
TOP3A-219ENST00000584887 PYURFQ96I23 114 aa17.17■□□□□ 0.34
TOP3A-219ENST00000584887 PITX2Q99697 317 aa17.17■□□□□ 0.34
TOP3A-219ENST00000584887 HCAR1Q9BXC0 346 aa17.17■□□□□ 0.34
TOP3A-219ENST00000584887 MAGEL2Q9UJ55 1249 aa17.17■□□□□ 0.34
TOP3A-219ENST00000584887 F5H0A9 414 aaPredicted RBP17.16■□□□□ 0.34
TOP3A-219ENST00000584887 F5H5K5 113 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 F5H5P2 479 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 RPS2P15880 293 aaKnown RBP17.16■□□□□ 0.34
TOP3A-219ENST00000584887 MSX2P35548 267 aaPredicted RBP17.16■□□□□ 0.34
TOP3A-219ENST00000584887 COMPP49747 757 aaPredicted RBP17.16■□□□□ 0.34
TOP3A-219ENST00000584887 HIST1H3AP68431 136 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 COX10Q12887 443 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 HIST2H3PS2Q5TEC6 136 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 CFAP77Q6ZQR2 320 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 HIST2H3AQ71DI3 136 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 SDR9C7Q8NEX9 313 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 SLC26A10Q8NG04 563 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 DVL3Q92997 716 aaPredicted RBP17.16■□□□□ 0.34
TOP3A-219ENST00000584887 DUX5Q96PT3 197 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 CDADC1Q9BWV3 514 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 GORASP2Q9H8Y8 452 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 NTN4Q9HB63 628 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 ZNF69Q9UC07 566 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 NUP50Q9UKX7 468 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 TMCC3Q9ULS5 477 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 INSIG2Q9Y5U4 225 aa17.16■□□□□ 0.34
TOP3A-219ENST00000584887 A8MXK9 166 aa17.15■□□□□ 0.34
TOP3A-219ENST00000584887 IFNL4K9M1U5 179 aa17.15■□□□□ 0.34
TOP3A-219ENST00000584887 FPR3P25089 353 aa17.15■□□□□ 0.34
TOP3A-219ENST00000584887 SLC36A3Q495N2 470 aa17.15■□□□□ 0.34
TOP3A-219ENST00000584887 NSMCE2Q96MF7 247 aa17.15■□□□□ 0.34
TOP3A-219ENST00000584887 SSBP3Q9BWW4 388 aaPredicted RBP17.15■□□□□ 0.34
TOP3A-219ENST00000584887 NSRP1Q9H0G5 558 aaKnown RBP17.15■□□□□ 0.34
TOP3A-219ENST00000584887 LRCH1Q9Y2L9 728 aa17.15■□□□□ 0.34
TOP3A-219ENST00000584887 IGHV3OR16-10A0A075B7F0 116 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 LRRC30A6NM36 301 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 IQCF6A8MYZ5 107 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 ARPC2O15144 300 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 ARPC3O15145 178 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 MLNRO43193 412 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 LCATP04180 440 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 SEMG1P04279 462 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 HLA-DPB1P04440 258 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 FABP3P05413 133 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 SELEP16581 610 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 RRM2P31350 389 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 IFNGR2P38484 337 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 AWAT1Q58HT5 328 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 FAM201AQ5SY85 155 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 SLC35F1Q5T1Q4 408 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 SLC18B1Q6NT16 456 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 ZMYND19Q96E35 227 aaPredicted RBP17.14■□□□□ 0.33
TOP3A-219ENST00000584887 ATF6BQ99941 703 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 SLC30A2Q9BRI3 323 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 TMEM100Q9NV29 134 aa17.14■□□□□ 0.33
TOP3A-219ENST00000584887 POLR3KQ9Y2Y1 108 aaPredicted RBP17.14■□□□□ 0.33
TOP3A-219ENST00000584887 OR6C68A6NDL8 312 aa17.13■□□□□ 0.33
TOP3A-219ENST00000584887 ACSM4P0C7M7 580 aa17.13■□□□□ 0.33
TOP3A-219ENST00000584887 HSD17B1P14061 328 aa17.13■□□□□ 0.33
TOP3A-219ENST00000584887 TRAP1Q12931 704 aaKnown RBP17.13■□□□□ 0.33
TOP3A-219ENST00000584887 ECH1Q13011 328 aa17.13■□□□□ 0.33
TOP3A-219ENST00000584887 KLF17Q5JT82 389 aaPredicted RBP17.13■□□□□ 0.33
TOP3A-219ENST00000584887 SAMD4BQ5PRF9 694 aaKnown RBP17.13■□□□□ 0.33
TOP3A-219ENST00000584887 CLEC12AQ5QGZ9 265 aa17.13■□□□□ 0.33
TOP3A-219ENST00000584887 CPLX4Q7Z7G2 160 aa17.13■□□□□ 0.33
TOP3A-219ENST00000584887 KLBQ86Z14 1044 aa17.13■□□□□ 0.33
TOP3A-219ENST00000584887 BCL6BQ8N143 479 aaPredicted RBP17.13■□□□□ 0.33
TOP3A-219ENST00000584887 OR52E2Q8NGJ4 325 aa17.13■□□□□ 0.33
TOP3A-219ENST00000584887 C1QTNF5Q9BXJ0 243 aa17.13■□□□□ 0.33
TOP3A-219ENST00000584887 DNAJC9-AS1A6NH13 148 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 SNX3O60493 162 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 WNT2P09544 360 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 IRF2P14316 349 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 PYCR1P32322 319 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 GNB2P62879 340 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.12■□□□□ 0.33
TOP3A-219ENST00000584887 MALLQ13021 153 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 RSPO1Q2MKA7 263 aaPredicted RBP17.12■□□□□ 0.33
TOP3A-219ENST00000584887 BTNL3Q6UXE8 466 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 ZNF620Q6ZNG0 422 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 DOK3Q7L591 496 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 C1orf87Q8N0U7 546 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 PGAM4Q8N0Y7 254 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 OR52L1Q8NGH7 329 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 GNPDA2Q8TDQ7 276 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 SPRYD4Q8WW59 207 aaPredicted RBP17.12■□□□□ 0.33
TOP3A-219ENST00000584887 PLEKHA8Q96JA3 519 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 CDRT15Q96T59 188 aa17.12■□□□□ 0.33
TOP3A-219ENST00000584887 TMEM246Q9BRR3 403 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms