RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 SIGLEC11Q96RL6 698 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 ZNF649Q9BS31 505 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 SP140LQ9H930 580 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 CLEC2DQ9UHP7 191 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 GRIP1Q9Y3R0 1128 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 MYO18BQ8IUG5 2567 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 TRIM64A6NGJ6 449 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 ABHD16AO95870 558 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 DBHP09172 617 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 OTX1P32242 354 aaPredicted RBP15.87■□□□□ 0.13
RFFL-211ENST00000584541 RGS6P49758 472 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 GBX2P52951 348 aaPredicted RBP15.87■□□□□ 0.13
RFFL-211ENST00000584541 NR1H2P55055 460 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 CDH15P55291 814 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 WNT4P56705 351 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 PSMA6P60900 246 aaKnown RBP15.87■□□□□ 0.13
RFFL-211ENST00000584541 KRTAP27-1Q3LI81 207 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 OR2G6Q5TZ20 316 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 LIPNQ5VXI9 398 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 NANOGP1Q8N7R0 232 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 TSPAN14Q8NG11 270 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 SPRYD4Q8WW59 207 aaPredicted RBP15.87■□□□□ 0.13
RFFL-211ENST00000584541 PLPPR2Q96GM1 343 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 C4orf45Q96LM5 186 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 DOK1Q99704 481 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 SPOCK3Q9BQ16 436 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 SPEF1Q9Y4P9 236 aa15.87■□□□□ 0.13
RFFL-211ENST00000584541 A0A087WXM4 84 aa15.86■□□□□ 0.13
RFFL-211ENST00000584541 IGHV2OR16-5A0A0B4J2B6 119 aa15.86■□□□□ 0.13
RFFL-211ENST00000584541 TMEM269A0A1B0GVZ9 245 aa15.86■□□□□ 0.13
RFFL-211ENST00000584541 RPP14O95059 124 aaKnown RBP15.86■□□□□ 0.13
RFFL-211ENST00000584541 CLDN1O95832 211 aa15.86■□□□□ 0.13
RFFL-211ENST00000584541 ANXA2P07355 339 aaKnown RBP15.86■□□□□ 0.13
RFFL-211ENST00000584541 CD3EP07766 207 aa15.86■□□□□ 0.13
RFFL-211ENST00000584541 HTR1AP08908 422 aa15.86■□□□□ 0.13
RFFL-211ENST00000584541 ACSM4P0C7M7 580 aa15.86■□□□□ 0.13
RFFL-211ENST00000584541 BSPH1Q075Z2 132 aa15.86■□□□□ 0.13
RFFL-211ENST00000584541 IRF3Q14653 427 aa15.86■□□□□ 0.13
RFFL-211ENST00000584541 NCMAPQ5T1S8 102 aa15.86■□□□□ 0.13
RFFL-211ENST00000584541 PIAS4Q8N2W9 510 aaPredicted RBP15.86■□□□□ 0.13
RFFL-211ENST00000584541 RADILQ96JH8 1075 aa15.86■□□□□ 0.13
RFFL-211ENST00000584541 ISG20L2Q9H9L3 353 aaKnown RBP15.86■□□□□ 0.13
RFFL-211ENST00000584541 ACOXLQ9NUZ1 547 aa15.86■□□□□ 0.13
RFFL-211ENST00000584541 R4GMQ9 66 aa15.86■□□□□ 0.13
RFFL-211ENST00000584541 PRR14LQ5THK1 2151 aa15.86■□□□□ 0.13
RFFL-211ENST00000584541 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.85■□□□□ 0.13
RFFL-211ENST00000584541 MAGEA13PA6NCF6 341 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 DPRXA6NFQ7 191 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 ACOD1A6NK06 481 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 LOC110117498-PIK3R3F6TDL0 507 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 ABCD4O14678 606 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 LCATP04180 440 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 ZNF35P13682 527 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 PCSK6P29122 969 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 ZNF121P58317 390 aaPredicted RBP15.85■□□□□ 0.13
RFFL-211ENST00000584541 MED22Q15528 200 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 TBCEQ15813 527 aaPredicted RBP15.85■□□□□ 0.13
RFFL-211ENST00000584541 RSPO1Q2MKA7 263 aaPredicted RBP15.85■□□□□ 0.13
RFFL-211ENST00000584541 SPARTQ8N0X7 666 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 ACBD4Q8NC06 268 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 GATAD2BQ8WXI9 593 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 PELI1Q96FA3 418 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 MOB1AQ9H8S9 216 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 VCX3AQ9NNX9 186 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 BRD7Q9NPI1 651 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 TRIM36Q9NQ86 728 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 KCNN3Q9UGI6 736 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 GTF2A1LQ9UNN4 478 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 N6AMT1Q9Y5N5 214 aa15.85■□□□□ 0.13
RFFL-211ENST00000584541 DOPEY1Q5JWR5 2465 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 CYSRT1A8MQ03 144 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 J3QW42 95 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 GOSR1O95249 250 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 COX6B1P14854 86 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 CALCRP30988 508 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 RAD52P43351 418 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 MMP16P51512 607 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 SPHARQ15513 63 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 SLC22A25Q6T423 547 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 KLBQ86Z14 1044 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 C1orf174Q8IYL3 243 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 PAQR4Q8N4S7 273 aaPredicted RBP15.84■□□□□ 0.13
RFFL-211ENST00000584541 OR52H1Q8NGJ2 320 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 OR5L1Q8NGL2 311 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 FCGR1BQ92637 280 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 APOBEC3DQ96AK3 386 aaPredicted RBP15.84■□□□□ 0.13
RFFL-211ENST00000584541 PIK3IP1Q96FE7 263 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 PGAM5Q96HS1 289 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 COG8Q96MW5 612 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 ACOT13Q9NPJ3 140 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 TBCCD1Q9NVR7 557 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 BABAM2Q9NXR7 383 aa15.84■□□□□ 0.13
RFFL-211ENST00000584541 ICMTO60725 284 aa15.83■□□□□ 0.12
RFFL-211ENST00000584541 RPSAP08865 295 aaKnown RBP15.83■□□□□ 0.12
RFFL-211ENST00000584541 SLC2A1P11166 492 aa15.83■□□□□ 0.12
RFFL-211ENST00000584541 PSMB10P40306 273 aa15.83■□□□□ 0.12
RFFL-211ENST00000584541 MAP2K4P45985 399 aa15.83■□□□□ 0.12
RFFL-211ENST00000584541 TAS2R43P59537 309 aa15.83■□□□□ 0.12
RFFL-211ENST00000584541 EMX1Q04741 257 aaPredicted RBP15.83■□□□□ 0.12
RFFL-211ENST00000584541 DAZAP2Q15038 168 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms