RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 DNASE1P24855 282 aa17.25■□□□□ 0.35
TOP3A-213ENST00000582230 HSD11B1P28845 292 aa17.25■□□□□ 0.35
TOP3A-213ENST00000582230 SELENOVP59797 346 aa17.25■□□□□ 0.35
TOP3A-213ENST00000582230 ROM1Q03395 351 aa17.25■□□□□ 0.35
TOP3A-213ENST00000582230 ZNF91Q05481 1191 aa17.25■□□□□ 0.35
TOP3A-213ENST00000582230 ZNF718Q3SXZ3 478 aa17.25■□□□□ 0.35
TOP3A-213ENST00000582230 COLCA1Q6ZS62 124 aa17.25■□□□□ 0.35
TOP3A-213ENST00000582230 RFPL4BQ6ZWI9 263 aa17.25■□□□□ 0.35
TOP3A-213ENST00000582230 THAP5Q7Z6K1 395 aa17.25■□□□□ 0.35
TOP3A-213ENST00000582230 TRAF4Q9BUZ4 470 aaPredicted RBP17.25■□□□□ 0.35
TOP3A-213ENST00000582230 C1QTNF5Q9BXJ0 243 aa17.25■□□□□ 0.35
TOP3A-213ENST00000582230 MROQ9BYG7 248 aa17.25■□□□□ 0.35
TOP3A-213ENST00000582230 PLK3Q9H4B4 646 aa17.25■□□□□ 0.35
TOP3A-213ENST00000582230 SP140LQ9H930 580 aa17.25■□□□□ 0.35
TOP3A-213ENST00000582230 FBN2P35556 2912 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 DCHS2Q6V1P9 2916 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 ZNF254O75437 659 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 CD8AP01732 235 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 ZNF250P15622 560 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 SLC6A9P48067 706 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 CXCR4P61073 352 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 ERVS71-1P61550 626 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 ACTC1P68032 377 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 ACTA1P68133 377 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 EGR3Q06889 387 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 ZNF322Q6U7Q0 402 aaPredicted RBP17.24■□□□□ 0.35
TOP3A-213ENST00000582230 KRT77Q7Z794 578 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 CDH24Q86UP0 819 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 ZNF679Q8IYX0 411 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 OR10H4Q8NGA5 316 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 CNIH3Q8TBE1 160 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 IGFBPL1Q8WX77 278 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 MARS2Q96GW9 593 aaKnown RBP17.24■□□□□ 0.35
TOP3A-213ENST00000582230 CXorf56Q9H5V9 222 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 MRPS18AQ9NVS2 196 aaKnown RBP17.24■□□□□ 0.35
TOP3A-213ENST00000582230 COPS3Q9UNS2 423 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 EXOGQ9Y2C4 368 aaKnown RBP17.24■□□□□ 0.35
TOP3A-213ENST00000582230 PLEKHA6Q9Y2H5 1048 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 CADP27708 2225 aa17.24■□□□□ 0.35
TOP3A-213ENST00000582230 APOL3O95236 402 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 FADS2O95864 444 aaKnown RBP17.23■□□□□ 0.35
TOP3A-213ENST00000582230 LCATP04180 440 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 GCH1P30793 250 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 DCTDP32321 178 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 PRKXP51817 358 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 RAB40BQ12829 278 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 CDK5R2Q13319 367 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 SWI5Q1ZZU3 235 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 MST1LQ2TV78 715 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 KLHL22Q53GT1 634 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 MBNL2Q5VZF2 373 aaKnown RBP17.23■□□□□ 0.35
TOP3A-213ENST00000582230 LRRN1Q6UXK5 716 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 ZNF283Q8N7M2 679 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 SYNPRQ8TBG9 265 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 SLC25A40Q8TBP6 338 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 KLF14Q8TD94 323 aaPredicted RBP17.23■□□□□ 0.35
TOP3A-213ENST00000582230 FBLIM1Q8WUP2 373 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 LGALS12Q96DT0 336 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 OR8B4Q96RC9 309 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 OR2J1Q9GZK6 312 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 AMBNQ9NP70 447 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 SLCO1C1Q9NYB5 712 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 STARD10Q9Y365 291 aa17.23■□□□□ 0.35
TOP3A-213ENST00000582230 A0A1W2PQL4 384 aaPredicted RBP17.22■□□□□ 0.35
TOP3A-213ENST00000582230 J3QRE1 110 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 CX3CR1P49238 355 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 KLF3P57682 345 aaPredicted RBP17.22■□□□□ 0.35
TOP3A-213ENST00000582230 SNRPD2P62316 118 aaKnown RBP17.22■□□□□ 0.35
TOP3A-213ENST00000582230 SNCBQ16143 134 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 SMN1Q16637 294 aaKnown RBP17.22■□□□□ 0.35
TOP3A-213ENST00000582230 MOGQ16653 247 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 MSMPQ1L6U9 139 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 C11orf71Q6IPW1 123 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 NAA40Q86UY6 237 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 ACBD7Q8N6N7 88 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 MBD6Q96DN6 1003 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 MYCBPQ99417 103 aaPredicted RBP17.22■□□□□ 0.35
TOP3A-213ENST00000582230 DOK1Q99704 481 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 ANKRD60Q9BZ19 345 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 MRPL37Q9BZE1 423 aaKnown RBP17.22■□□□□ 0.35
TOP3A-213ENST00000582230 BEX4Q9NWD9 120 aaPredicted RBP17.22■□□□□ 0.35
TOP3A-213ENST00000582230 DUSP13Q9UII6 198 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 IKZF2Q9UKS7 526 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 FZR1Q9UM11 496 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 LRP12Q9Y561 859 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 PMF1-BGLAPU3KQ54 211 aa17.22■□□□□ 0.35
TOP3A-213ENST00000582230 RAI1Q7Z5J4 1906 aaPredicted RBP17.21■□□□□ 0.35
TOP3A-213ENST00000582230 IGLV3-9A0A075B6K5 115 aa17.21■□□□□ 0.35
TOP3A-213ENST00000582230 TMEM129A0AVI4 362 aa17.21■□□□□ 0.35
TOP3A-213ENST00000582230 IRGMA1A4Y4 181 aa17.21■□□□□ 0.35
TOP3A-213ENST00000582230 OVOL3O00110 214 aa17.21■□□□□ 0.35
TOP3A-213ENST00000582230 RIDAP52758 137 aaKnown RBP17.21■□□□□ 0.35
TOP3A-213ENST00000582230 MALLQ13021 153 aa17.21■□□□□ 0.35
TOP3A-213ENST00000582230 SPATA46Q5T0L3 261 aa17.21■□□□□ 0.35
TOP3A-213ENST00000582230 TBX5Q99593 518 aa17.21■□□□□ 0.35
TOP3A-213ENST00000582230 SYT3Q9BQG1 590 aa17.21■□□□□ 0.35
TOP3A-213ENST00000582230 GPR160Q9UJ42 338 aa17.21■□□□□ 0.35
TOP3A-213ENST00000582230 RAB26Q9ULW5 256 aa17.21■□□□□ 0.35
TOP3A-213ENST00000582230 HEATR1Q9H583 2144 aaKnown RBP17.21■□□□□ 0.35
TOP3A-213ENST00000582230 NAV2Q8IVL1 2488 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms