RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 IGFL2Q6UWQ7 119 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 Q6ZNX1 250 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 Q6ZS92 163 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 ABHD12BQ7Z5M8 362 aaPredicted RBP8.2□□□□□ -1.1
SS18-220ENST00000582092 TMEM123Q8N131 208 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 UBE2J2Q8N2K1 259 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 Q8N402 240 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 ZFP62Q8NB50 900 aaPredicted RBP8.2□□□□□ -1.1
SS18-220ENST00000582092 SETD6Q8TBK2 473 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 RPS4Y2Q8TD47 263 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 FOXRED1Q96CU9 486 aaPredicted RBP8.2□□□□□ -1.1
SS18-220ENST00000582092 SCMH1Q96GD3 660 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 PGAM5Q96HS1 289 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 ZNF845Q96IR2 970 aaPredicted RBP8.2□□□□□ -1.1
SS18-220ENST00000582092 KCNJ15Q99712 375 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 ZNF416Q9BWM5 594 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 PBOV1Q9GZY1 135 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 PPIL3Q9H2H8 161 aaKnown RBP8.2□□□□□ -1.1
SS18-220ENST00000582092 MIXL1Q9H2W2 232 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 CALHM2Q9HA72 323 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 TBCCD1Q9NVR7 557 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 C14orf119Q9NWQ9 140 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 PLEK2Q9NYT0 353 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 SPATA2Q9UM82 520 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 FOXJ3Q9UPW0 622 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 MRPS7Q9Y2R9 242 aaKnown RBP8.2□□□□□ -1.1
SS18-220ENST00000582092 LHFPL6Q9Y693 200 aa8.2□□□□□ -1.1
SS18-220ENST00000582092 BOD1L1Q8NFC6 3051 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 CFAP46Q8IYW2 2715 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 LOC107986453A0A1B0GWG9 222 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 SHISA3A0PJX4 238 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 ZNF716A6NP11 495 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 CENPXA8MT69 81 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 ZNF587BE7ETH6 402 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 F5H5K5 113 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 P2RY10O00398 339 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 RER1O15258 196 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 PTTG1O95997 202 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 PNPP00491 289 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 ISG15P05161 165 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 ERCC1P07992 297 aaPredicted RBP8.19□□□□□ -1.1
SS18-220ENST00000582092 CELA3AP09093 270 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 CST2P09228 141 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 FCGR2AP12318 317 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 SNRPBP14678 240 aaKnown RBP8.19□□□□□ -1.1
SS18-220ENST00000582092 ART1P52961 327 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 TPTEP56180 551 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 CLDN18P56856 261 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 PSMA6P60900 246 aaKnown RBP8.19□□□□□ -1.1
SS18-220ENST00000582092 MADCAM1Q13477 382 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 SF3B4Q15427 424 aaKnown RBP eCLIP8.19□□□□□ -1.1
SS18-220ENST00000582092 RAB11BQ15907 218 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 ELFN2Q5R3F8 820 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 FAM27BQ5VT28 67 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 ABLIM2Q6H8Q1 611 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 PYHIN1Q6K0P9 492 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 FAM180AQ6UWF9 173 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 CFAP77Q6ZQR2 320 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 FAM57BQ71RH2 274 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 SLC16A14Q7RTX9 510 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 SNX29P2Q8IUI4 249 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 SERPINA12Q8IW75 414 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 ELMOD2Q8IZ81 293 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 CISD2Q8N5K1 135 aaKnown RBP8.19□□□□□ -1.1
SS18-220ENST00000582092 ZIC4Q8N9L1 334 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 OR5D14Q8NGL3 314 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 TMEM45BQ96B21 275 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 APH1AQ96BI3 265 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 ADGRG7Q96K78 797 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 SRRQ9GZT4 340 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 SLCO5A1Q9H2Y9 848 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 PLEKHA1Q9HB21 404 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 CRLF2Q9HC73 371 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 NEK6Q9HC98 313 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 CYSLTR2Q9NS75 346 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 LUZP4Q9P127 313 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 FBXL3Q9UKT7 428 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 TIMM10BQ9Y5J6 103 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 ETV7Q9Y603 341 aa8.19□□□□□ -1.1
SS18-220ENST00000582092 GCN1Q92616 2671 aaKnown RBP8.19□□□□□ -1.1
SS18-220ENST00000582092 DOPEY2Q9Y3R5 2298 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 TRBV5-7A0A0A0MS05 114 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 ZNF724A8MTY0 619 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 PIN1P1O15428 100 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 SGCEO43556 437 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 MTRF1O75570 445 aaKnown RBP8.18□□□□□ -1.1
SS18-220ENST00000582092 PAHP00439 452 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 YES1P07947 543 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 PSKH1P11801 424 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 IL7P13232 177 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 ATF1P18846 271 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 NR4A2P43354 598 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 MAGEB1P43366 347 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 ZNF133P52736 654 aaPredicted RBP8.18□□□□□ -1.1
SS18-220ENST00000582092 SCAND1P57086 179 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 ZNF121P58317 390 aaPredicted RBP8.18□□□□□ -1.1
SS18-220ENST00000582092 TAB1Q15750 504 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 CEACAM16Q2WEN9 425 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 GFOD2Q3B7J2 385 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 RIPPLY2Q5TAB7 128 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms