RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 AQP8O94778 261 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 WISP3O95389 354 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 CTSLP07711 333 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 CISD3P0C7P0 127 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 KIR3DL2P43630 455 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 RPS5P46782 204 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 RAB7AP51149 207 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 PRR3P79522 188 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 ART3Q13508 389 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 TCEAL5Q5H9L2 206 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 Q5W150 140 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 SAXO2Q658L1 398 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 CALHM1Q8IU99 346 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 MICU2Q8IYU8 434 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 LGI3Q8N145 548 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 OR11H7Q8NGC8 314 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 TCEAL3Q969E4 200 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 NRBF2Q96F24 287 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 RNF145Q96MT1 663 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 CAMK2N2Q96S95 79 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 MRM3Q9HC36 420 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 MRPL22Q9NWU5 206 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 RCL1Q9Y2P8 373 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 TSSC4Q9Y5U2 329 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 PHLPP2Q6ZVD8 1323 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 TRAV25A0A0B4J276 109 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 A0A0U1RQV1 116 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 TSPAN11A1L157 253 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 SYCE1LA8MT33 242 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 SUPT3HB4E1H0 165 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 GOLGA8TH3BQL2 631 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 ZNF207O43670 478 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 FCN3O75636 299 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 YIF1AO95070 293 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 HLA-HP01893 362 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 APCSP02743 223 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 IFNW1P05000 195 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 ASGR1P07306 291 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 UBCP0CG48 685 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 NPY1RP25929 384 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 RFC3P40938 356 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 IRF8Q02556 426 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 TRMT5Q32P41 509 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 CHRFAM7AQ494W8 412 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 ABCA11PQ4W5N1 156 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 C5orf47Q569G3 176 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 AVPI1Q5T686 147 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 STUMQ69YW2 141 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 SNX20Q7Z614 316 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 NKAIN4Q8IVV8 208 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 UBALD2Q8IYN6 164 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 COMMD1Q8N668 190 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 OR6Q1Q8NGQ2 317 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 PTX4Q96A99 478 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 FLYWCH2Q96CP2 140 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 DYNLL2Q96FJ2 89 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 HSD17B10Q99714 261 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 LYRM4Q9HD34 91 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 MRPS30Q9NP92 439 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 SIRT7Q9NRC8 400 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 AHSPQ9NZD4 102 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 MYEF2Q9P2K5 600 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 ZNF282Q9UDV7 671 aaPredicted RBP2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 CAB39Q9Y376 341 aaPredicted RBP2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 TNS2Q63HR2 1409 aa2.75□□□□□ -1.97
SMCHD1-205ENST00000581383 TRAV19A0A0A6YYK7 116 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 TMEM150BA6NC51 233 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 LRCOL1A6NCL2 159 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 NCF1BA6NI72 391 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 LRRIQ4A6NIV6 560 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 NCF1CA8MVU1 366 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 GABRPO00591 440 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 NME4O00746 187 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 BCKDKO14874 412 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 SFTPCP11686 197 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 MUC1P15941 1255 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 RAB4AP20338 218 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 NBL1P41271 181 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 RBM34P42696 430 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 SERPINB8P50452 374 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 ZNF121P58317 390 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 KIR2DS1Q14954 304 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 WDFY1Q8IWB7 410 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 H1FOOQ8IZA3 346 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 GPR26Q8NDV2 337 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 OR4K5Q8NGD3 323 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 DCPSQ96C86 337 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 NARS2Q96I59 477 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 ZNF488Q96MN9 340 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 IQCGQ9H095 443 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 OR52D1Q9H346 318 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 PIGUQ9H490 435 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 SLC38A10Q9HBR0 1119 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 PXMP2Q9NR77 195 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 CLN6Q9NWW5 311 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 SLC39A1Q9NY26 324 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 OPN4Q9UHM6 478 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 PALLDQ8WX93 1383 aa2.74□□□□□ -1.97
SMCHD1-205ENST00000581383 TTC41PQ6P2S7 1318 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms