RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 HDHD2Q9H0R4 259 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 RERGLQ9H628 205 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 PTTG3PQ9NZH4 202 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 IER3IP1Q9Y5U9 82 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 SOX21Q9Y651 276 aaPredicted RBP8.86□□□□□ -0.99
RFFL-209ENST00000581265 ENPP4Q9Y6X5 453 aa8.86□□□□□ -0.99
RFFL-209ENST00000581265 F5H5P2 479 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 H0YL77 283 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 DCTN6O00399 190 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 NME4O00746 187 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 SOCS2O14508 198 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 GSTA4O15217 222 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 MLNRO43193 412 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 SERPINA1P01009 418 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 H1F0P07305 194 aaKnown RBP8.85□□□□□ -0.99
RFFL-209ENST00000581265 CRABP1P29762 137 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 PMELP40967 661 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 CDKN2AP42771 156 aaKnown RBP8.85□□□□□ -0.99
RFFL-209ENST00000581265 OMPP47874 163 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 FXYD6P3P58550 94 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 BPIFB3P59826 476 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 SF3A3Q12874 501 aaKnown RBP eCLIP8.85□□□□□ -0.99
RFFL-209ENST00000581265 COX10Q12887 443 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 KRTAP27-1Q3LI81 207 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 ZNF404Q494X3 552 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 C8orf82Q6P1X6 216 aaPredicted RBP8.85□□□□□ -0.99
RFFL-209ENST00000581265 NLRC3Q7RTR2 1065 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 MOGAT3Q86VF5 341 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 C1orf87Q8N0U7 546 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 CELF2-AS1Q8N7Q2 184 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 Q8TCH9 128 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 ERGIC1Q969X5 290 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 PKP2Q99959 881 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 TMEM100Q9NV29 134 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 NDUFAF4Q9P032 175 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 MMP24Q9Y5R2 645 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 LHFPL6Q9Y693 200 aa8.85□□□□□ -0.99
RFFL-209ENST00000581265 WNK1Q9H4A3 2382 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 IGHV3OR16-10A0A075B7F0 116 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 IGLV1-36A0A0B4J1U3 117 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 NDUFAB1O14561 156 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 PPP1R3DO95685 299 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 GPANK1O95872 356 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 HLA-DPB1P04440 258 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 H2AFXP16104 143 aaPredicted RBP8.84□□□□□ -0.99
RFFL-209ENST00000581265 SELEP16581 610 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 RHCEP18577 417 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 FPR3P25089 353 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 PSMB10P40306 273 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 PITPNBP48739 271 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 GSK3BP49841 420 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 RPS6KA3P51812 740 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 SLC7A2P52569 658 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 ECH1Q13011 328 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 MAB21L1Q13394 359 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 OCLNQ16625 522 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 MEP1BQ16820 701 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 FAM201AQ5SY85 155 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 WDR25Q64LD2 544 aaPredicted RBP8.84□□□□□ -0.99
RFFL-209ENST00000581265 DNM1P34Q6PK57 102 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 ZNF841Q6ZN19 808 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 DCDC5Q6ZRR9 648 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 JAZF1Q86VZ6 243 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 OR6V1Q8N148 313 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 FITM2Q8N6M3 262 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 BHLHE23Q8NDY6 225 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 OR8B3Q8NGG8 313 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 TMIGD2Q96BF3 282 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 RSRC1Q96IZ7 334 aaKnown RBP8.84□□□□□ -0.99
RFFL-209ENST00000581265 C7orf34Q96L11 122 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 TSSK2Q96PF2 358 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 OR8B2Q96RD0 313 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 NUDT16L1Q9BRJ7 211 aaKnown RBP8.84□□□□□ -0.99
RFFL-209ENST00000581265 HCAR1Q9BXC0 346 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 EFCAB1Q9HAE3 211 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 CLN8Q9UBY8 286 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 B9D1Q9UPM9 204 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 POLR1DQ9Y2S0 133 aa8.84□□□□□ -0.99
RFFL-209ENST00000581265 FAM32AQ9Y421 112 aaKnown RBP8.84□□□□□ -0.99
RFFL-209ENST00000581265 NOTCH1P46531 2555 aa8.83□□□□□ -1
RFFL-209ENST00000581265 TRAV40A0A0B4J280 105 aa8.83□□□□□ -1
RFFL-209ENST00000581265 TRBV4-1A0A0J9YWV2 114 aa8.83□□□□□ -1
RFFL-209ENST00000581265 IGHV3-64DA0A0J9YX35 117 aa8.83□□□□□ -1
RFFL-209ENST00000581265 A0A1B0GUS0 222 aa8.83□□□□□ -1
RFFL-209ENST00000581265 UNC119BA6NIH7 251 aa8.83□□□□□ -1
RFFL-209ENST00000581265 PHYHO14832 338 aa8.83□□□□□ -1
RFFL-209ENST00000581265 ARPC3O15145 178 aa8.83□□□□□ -1
RFFL-209ENST00000581265 HOXA3O43365 443 aaPredicted RBP8.83□□□□□ -1
RFFL-209ENST00000581265 SASH3O75995 380 aa8.83□□□□□ -1
RFFL-209ENST00000581265 ACSM4P0C7M7 580 aa8.83□□□□□ -1
RFFL-209ENST00000581265 COX4I1P13073 169 aa8.83□□□□□ -1
RFFL-209ENST00000581265 MDKP21741 143 aaPredicted RBP8.83□□□□□ -1
RFFL-209ENST00000581265 MDH1P40925 334 aaKnown RBP8.83□□□□□ -1
RFFL-209ENST00000581265 GK2Q14410 553 aaPredicted RBP8.83□□□□□ -1
RFFL-209ENST00000581265 SEC23BQ15437 767 aa8.83□□□□□ -1
RFFL-209ENST00000581265 FGD3Q5JSP0 725 aa8.83□□□□□ -1
RFFL-209ENST00000581265 ZNF362Q5T0B9 420 aaPredicted RBP8.83□□□□□ -1
RFFL-209ENST00000581265 CORO6Q6QEF8 472 aa8.83□□□□□ -1
RFFL-209ENST00000581265 SMARCD3Q6STE5 483 aa8.83□□□□□ -1
RFFL-209ENST00000581265 LYPD2Q6UXB3 125 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms