RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 PTBP1P26599 531 aaKnown RBP eCLIP11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 GIFP27352 417 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SLC6A1P30531 599 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CARD18P57730 90 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ALKBH1Q13686 389 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 MFSD13AQ14CX5 517 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 FCN2Q15485 313 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 HYAL4Q2M3T9 481 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SLC36A2Q495M3 483 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 NHLRC1Q6VVB1 395 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZFP62Q8NB50 900 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 DNAAF1Q8NEP3 725 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 OR6S1Q8NH40 331 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 LRRC20Q8TCA0 184 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 LGALS14Q8TCE9 139 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ASB10Q8WXI3 467 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SCMH1Q96GD3 660 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 GPR137Q96N19 417 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 B9D1Q9UPM9 204 aa11.25□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SLC22A23A1A5C7 686 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 LINC00862A6NCI5 91 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 FABP7O15540 132 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 UPK3AO75631 287 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SLC22A5O76082 557 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CXCL3P19876 107 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 NTF4P34130 210 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PER3P56645 1201 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ADAM8P78325 824 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SLC35A1P78382 337 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZNF684Q5T5D7 378 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 FAAP20Q6NZ36 180 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZNF782Q6ZMW2 699 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 KCTD20Q7Z5Y7 419 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SIAH3Q8IW03 269 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 UEVLDQ8IX04 471 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 DACT3Q96B18 629 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TCF7L1Q9HCS4 588 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SLCO1C1Q9NYB5 712 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 B4GALT7Q9UBV7 327 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ELF5Q9UKW6 265 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 RAXQ9Y2V3 346 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TMEM14AQ9Y6G1 99 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 AQP7P3A6NL99 342 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SMAD9O15198 467 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TRAF3IP2O43734 574 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PMS2P2O95744 297 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 HPNP05981 417 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZNF43P17038 809 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ALOX5APP20292 161 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZP4Q12836 540 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 GFI1Q99684 422 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 NUP50Q9UKX7 468 aa11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 COA3Q9Y2R0 106 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-217ENST00000580287 FAM25EA8MYX2 175 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 MAS1P04201 325 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 LHX2P50458 406 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CLDN17P56750 224 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 RIN1Q13671 783 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SLC10A1Q14973 349 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PLA1AQ53H76 456 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 IGFL2Q6UWQ7 119 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SLC51BQ86UW2 128 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 EXTL1Q92935 676 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CREB3L1Q96BA8 519 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ADGRG7Q96K78 797 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 COMMD4Q9H0A8 199 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SLITRK2Q9H156 845 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ELOVL3Q9HB03 270 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ABRACLQ9P1F3 81 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 AUP1Q9Y679 476 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CACNG2Q9Y698 323 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 NBEAQ8NFP9 2946 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PDCD5O14737 125 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CEACAM4O75871 244 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 Q499Y3 187 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TMEM255AQ5JRV8 349 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SFRP4Q6FHJ7 346 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PYHIN1Q6K0P9 492 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TEX261Q6UWH6 196 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TMEM178AQ8NBL3 297 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 OR51A4Q8NGJ6 313 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 OR2G2Q8NGZ5 317 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 OR10AC1Q8NH08 325 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 OTOSQ8NHW6 89 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ABHD3Q8WU67 409 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TSEN15Q8WW01 171 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 YIPF5Q969M3 257 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 RNF166Q96A37 237 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 LDAHQ9H6V9 325 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 EXO5Q9H790 373 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 FLVCR2Q9UPI3 526 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 FKBP7Q9Y680 259 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 U3KQ87 197 aa11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 RP1L1Q8IWN7 2480 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-217ENST00000580287 RAC3P60763 192 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PLA2G7Q13093 441 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 OR7E24Q6IFN5 339 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 UNQ9370/PRO34162Q6UXP9 181 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms