RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 MRPS18AQ9NVS2 196 aaKnown RBP3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 SMPD3Q9NY59 655 aaPredicted RBP3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 HAO2Q9NYQ3 351 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 KIF17Q9P2E2 1029 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 ATPIF1Q9UII2 106 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 COPS3Q9UNS2 423 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 PCDHGB5Q9Y5G0 923 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 MALRD1Q5VYJ5 2156 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 MAP1AP78559 2803 aaPredicted RBP3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 ARHGAP32A7KAX9 2087 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 HIVEP1P15822 2718 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 ACANP16112 2415 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 IGLV3-9A0A075B6K5 115 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 LOC100130705A0A1B0GUX0 176 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 A0A1B0GWJ7 208 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 A0A1W2PPL8 197 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 TMEM129A0AVI4 362 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 CIB4A0PJX0 185 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 TRIM64A6NGJ6 449 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 RIIAD1A6NNX1 92 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 PRR23D1E9PI22 279 aaPredicted RBP3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 H0YAE9 185 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 XKRYO14609 159 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ABCD4O14678 606 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 RER1O15258 196 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 GPRIN2O60269 458 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 SELENOFO60613 162 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 SMPD2O60906 423 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ENTPD6O75354 484 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 UBL3O95164 117 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 BAG2O95816 211 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 RENP00797 406 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 NGFP01138 241 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 HMGN1P05114 100 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 SBK2P0C263 348 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 PRR23D2P0DMB1 279 aaPredicted RBP3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 COX5BP10606 129 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 NR2C1P13056 603 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 COX6B1P14854 86 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF3P17036 446 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ALOX5APP20292 161 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 PTAFRP25105 342 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 APEX1P27695 318 aaKnown RBP3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 POU1F1P28069 291 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 HTR1FP30939 366 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ARR3P36575 388 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 CAPGP40121 348 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 OPRL1P41146 370 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF84P51523 738 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 IDH3GP51553 393 aaPredicted RBP3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ARHGDIAP52565 204 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 RAD23AP54725 363 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ERVS71-1P61550 626 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 TGFBR3Q03167 851 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ROM1Q03395 351 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF85Q03923 595 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 GLO1Q04760 184 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF91Q05481 1191 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 PIGFQ07326 219 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 TNK1Q13470 666 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 APOFQ13790 326 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 RAB39AQ14964 217 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 RAB35Q15286 201 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ADIPOQQ15848 244 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 GSG1Q2KHT4 349 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF672Q499Z4 452 aaPredicted RBP3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 KLHL12Q53G59 568 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 FBXW10Q5XX13 1052 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF774Q6NX45 483 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF704Q6ZNC4 412 aaPredicted RBP3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 DNM1P46Q6ZS02 220 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 Q6ZSR3 168 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 MEPCEQ7L2J0 689 aaKnown RBP3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 SSX8Q7RTT4 187 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC16A14Q7RTX9 510 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 DPPA2Q7Z7J5 298 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 DTX2Q86UW9 622 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 JAZF1Q86VZ6 243 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 LINC00346Q8IVM7 164 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 CCDC36Q8IYA8 594 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 LRRC18Q8N456 261 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 GALNT4Q8N4A0 578 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF485Q8NCK3 441 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 NUP37Q8NFH4 326 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 OR8J1Q8NGP2 316 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 AKR7LQ8NHP1 331 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 OTOSQ8NHW6 89 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 FAM81AQ8TBF8 368 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 RPS4Y2Q8TD47 263 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 TMEM171Q8WVE6 324 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 RNF133Q8WVZ7 376 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 TRUB1Q8WWH5 349 aaKnown RBP3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 NEU4Q8WWR8 484 aaPredicted RBP3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC7A6Q92536 515 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ZMYND19Q96E35 227 aaPredicted RBP3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 PIK3IP1Q96FE7 263 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 RBP7Q96R05 134 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 IL4I1Q96RQ9 567 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 TEAD3Q99594 435 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 COQ7Q99807 217 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms