RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	NANP	Q8TBE9	248 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329		Q8TCH9	128 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	SLC26A7	Q8TE54	656 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	ZNF418	Q8TF45	676 aa	Predicted RBP	3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	RASSF5	Q8WWW0	418 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	RAB1C	Q92928	201 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	GCDH	Q92947	438 aa	Predicted RBP	3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	POP5	Q969H6	163 aa	Known RBP	3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	RAB39B	Q96DA2	213 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	RSRC1	Q96IZ7	334 aa	Known RBP	3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	RBP7	Q96R05	134 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	NMNAT3	Q96T66	252 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	AMELY	Q99218	206 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	SIKE1	Q9BRV8	207 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	BTBD10	Q9BSF8	475 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	NMNAT2	Q9BZQ4	307 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	SIRPD	Q9H106	197 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	RASSF4	Q9H2L5	321 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	EGLN3	Q9H6Z9	239 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	ZNF696	Q9H7X3	374 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	DECR2	Q9NUI1	292 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	PLEK2	Q9NYT0	353 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	IL19	Q9UHD0	177 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	CYB5R1	Q9UHQ9	305 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	NUP50	Q9UKX7	468 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	PPP1R3C	Q9UQK1	317 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	CAPN7	Q9Y6W3	813 aa		3.69	□□□□□ -1.82
PPP4R1-209	ENST00000578329	CENPVL3	A0A0U1RRI6	287 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	ISPD	A4D126	451 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	HTR3E	A5X5Y0	456 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	UNC119B	A6NIH7	251 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329		A6NIZ1	184 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	PRR32	B1ATL7	298 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	TRIM77	I1YAP6	450 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	SLC22A2	O15244	555 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	AHCYL1	O43865	530 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	TIMM8A	O60220	97 aa	Predicted RBP	3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	KHDRBS3	O75525	346 aa	Known RBP	3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	FOXH1	O75593	365 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	NDUFB2	O95178	105 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	H1F0	P07305	194 aa	Known RBP	3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	PPIAL4G	P0DN37	164 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	CLU	P10909	449 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	SELL	P14151	372 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	ATP6V1B2	P21281	511 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	GATA3	P23771	443 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	GCH1	P30793	250 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	PYCR1	P32322	319 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	MDH2	P40926	338 aa	Known RBP	3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	CD200	P41217	278 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	HMGA2	P52926	109 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	RAP1B	P61224	184 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	FGF12	P61328	243 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	RAP1A	P62834	184 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	ACTG1	P63261	375 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	MS4A2	Q01362	244 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	SCRN3	Q0VDG4	424 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	POU4F2	Q12837	409 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	PPP1R8	Q12972	351 aa	Known RBP	3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	ZNF181	Q2M3W8	571 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	RFX4	Q33E94	735 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	ANKDD1A	Q495B1	522 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	WDR25	Q64LD2	544 aa	Predicted RBP	3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	HCP5	Q6MZN7	132 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	ZNF730	Q6ZMV8	503 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	DPY19L2P2	Q6ZN68	376 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	ZNF620	Q6ZNG0	422 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	FAM90A1	Q86YD7	464 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	GLB1L2	Q8IW92	636 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	PARP8	Q8N3A8	854 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	GCSAM	Q8N6F7	178 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	C3orf56	Q8N813	242 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	CYB561A3	Q8NBI2	242 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	BHLHE23	Q8NDY6	225 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	OR4K13	Q8NH42	304 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	OR52J3	Q8NH60	311 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	OR2AE1	Q8NHA4	323 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	ST7L	Q8TDW4	575 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	SNX33	Q8WV41	574 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	C17orf50	Q8WW18	174 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	DYDC1	Q8WWB3	177 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	WFDC12	Q8WWY7	111 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	RAB40A	Q8WXH6	277 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	PTP4A1	Q93096	173 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	ZNF570	Q96NI8	536 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	COQ7	Q99807	217 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	SH3GL1	Q99961	368 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	FNDC11	Q9BVV2	318 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	RBM4	Q9BWF3	364 aa	Known RBP	3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	SUCNR1	Q9BXA5	334 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	CHIA	Q9BZP6	476 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	SEMA6A	Q9H2E6	1030 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	OR52D1	Q9H346	318 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	ANKRD19P	Q9H560	264 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	UNKL	Q9H9P5	680 aa	Known RBP	3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	SRA1	Q9HD15	236 aa	Known RBP	3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	CYSLTR2	Q9NS75	346 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	DDX28	Q9NUL7	540 aa	Known RBP	3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	ARL8B	Q9NVJ2	186 aa		3.68	□□□□□ -1.82
PPP4R1-209	ENST00000578329	C1RL	Q9NZP8	487 aa		3.68	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms