RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 COLCA1Q6ZS62 124 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 SSX6Q7RTT6 188 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 LHFPL3Q86UP9 236 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 MDP1Q86V88 176 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 LINC00346Q8IVM7 164 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 SPARTQ8N0X7 666 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 OR10H4Q8NGA5 316 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 SMAP2Q8WU79 429 aaPredicted RBP9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 THEM6Q8WUY1 208 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 SGCDQ92629 289 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 HTRA1Q92743 480 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 RNF166Q96A37 237 aaPredicted RBP9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 SLAMF6Q96DU3 332 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 POM121L2Q96KW2 1035 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 WFIKKN1Q96NZ8 548 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 DCLRE1CQ96SD1 692 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 AMELYQ99218 206 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ATF6BQ99941 703 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 MROQ9BYG7 248 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 NOX3Q9HBY0 568 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ISYNA1Q9NPH2 558 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 NPDC1Q9NQX5 325 aaPredicted RBP9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ERVK-18Q9QC07 812 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 NDRG3Q9UGV2 375 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 MRM2Q9UI43 246 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 KLHDC2Q9Y2U9 406 aa9.66□□□□□ -0.86
CDK5RAP3-204ENST00000577664 TLN2Q9Y4G6 2542 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 MAGEA13PA6NCF6 341 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 METTL15A6NJ78 407 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 FAM90A27PA6NNH2 459 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 PRR32B1ATL7 298 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 J3QW42 95 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 SRSF10O75494 262 aaKnown RBP9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 APOL3O95236 402 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 APOC1P02654 83 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 TACSTD2P09758 323 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 PATE4P0C8F1 98 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 CD79AP11912 226 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ZNF35P13682 527 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 MYL12AP19105 171 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 PCMT1P22061 227 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 HOXC12P31275 282 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 TUBA4AP68366 448 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 BDH1Q02338 343 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 EMX1Q04741 257 aaPredicted RBP9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 PLP2Q04941 152 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 TBCEQ15813 527 aaPredicted RBP9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 CCDC58Q4VC31 144 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 OTPQ5XKR4 325 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 TMPRSS11AQ6ZMR5 421 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 PRSS45Q7RTY3 260 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 C1orf174Q8IYL3 243 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 OR1F12Q8NHA8 337 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 RPS4Y2Q8TD47 263 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ITFG2Q969R8 447 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 MBD6Q96DN6 1003 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 KCNJ15Q99712 375 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ALG8Q9BVK2 526 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 RNF121Q9H920 327 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 SLC24A3Q9HC58 644 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 CHCHD3Q9NX63 227 aaKnown RBP9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 SLCO1C1Q9NYB5 712 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 PLEK2Q9NYT0 353 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 CLEC2DQ9UHP7 191 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 ERGIC3Q9Y282 383 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 POLR1DQ9Y2S0 133 aa9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 LSM2Q9Y333 95 aaKnown RBP9.65□□□□□ -0.86
CDK5RAP3-204ENST00000577664 LOC100509620A0A075B734 347 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 A0A087WXM4 84 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 IQCMA0A1B0GVH7 501 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 RNF212BA8MTL3 300 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 GOSR1O95249 250 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 LY6G6DO95868 133 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CD1AP06126 327 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TUBG1P23258 451 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 PTAFRP25105 342 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 STOMP27105 288 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 PCSK6P29122 969 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TGM4P49221 684 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 PIGFQ07326 219 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 GPR50Q13585 617 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 LIPNQ5VXI9 398 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ZNF774Q6NX45 483 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 DRAM2Q6UX65 266 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TMEM200AQ86VY9 491 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 DMRTC2Q8IXT2 367 aaPredicted RBP9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 KLHL36Q8N4N3 616 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 RFLNBQ8N5W9 214 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 WFDC11Q8NEX6 87 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TSPAN14Q8NG11 270 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 OR1J2Q8NGS2 313 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 SNX33Q8WV41 574 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 MND1Q9BWT6 205 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ELOVL3Q9HB03 270 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 NGBQ9NPG2 151 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ACOT13Q9NPJ3 140 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TUBG2Q9NRH3 451 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TBCCD1Q9NVR7 557 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 BABAM2Q9NXR7 383 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 KCNN3Q9UGI6 736 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms