RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 RHOUQ7L0Q8 258 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 MEPCEQ7L2J0 689 aaKnown RBP10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 SLC16A9Q7RTY1 509 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 LRP11Q86VZ4 500 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 KRTAP1-3Q8IUG1 177 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 PACRGLQ8N7B6 248 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 WFDC11Q8NEX6 87 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 OR10S1Q8NGN2 331 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 OTOSQ8NHW6 89 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 KLF14Q8TD94 323 aaPredicted RBP10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 ST7LQ8TDW4 575 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 RNF133Q8WVZ7 376 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 TRUB1Q8WWH5 349 aaKnown RBP10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 NEU4Q8WWR8 484 aaPredicted RBP10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 RFKQ969G6 155 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 SORCS2Q96PQ0 1159 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 IL4I1Q96RQ9 567 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 CNN2Q99439 309 aaKnown RBP10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 ABHD6Q9BV23 337 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 C1QTNF5Q9BXJ0 243 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 YIPF3Q9GZM5 350 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 SP140LQ9H930 580 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 CYSLTR2Q9NS75 346 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 CENPMQ9NSP4 180 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 TMEM14AQ9Y6G1 99 aa10.9□□□□□ -0.66
CDK5RAP3-203ENST00000577442 PLSCR5A0PG75 271 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 NDUFS7O75251 213 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 CLPTM1O96005 669 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 F12P00748 615 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 LCATP04180 440 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 LYNP07948 512 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 PSKH1P11801 424 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 RAC2P15153 192 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 HSD11B1P28845 292 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 OTX1P32242 354 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 ALDH3B1P43353 468 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 EFNB1P98172 346 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 POU4F2Q12837 409 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 MALLQ13021 153 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 TMED1Q13445 227 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 GGTLC2Q14390 218 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 CLEC12BQ2HXU8 276 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 PCGF3Q3KNV8 242 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 ZIK1Q3SY52 487 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 AADACL4Q5VUY2 407 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 Q96MF0 132 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 MNTQ99583 582 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 TEAD3Q99594 435 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 KCNJ15Q99712 375 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 SLC29A1Q99808 456 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 VCXQ9H320 206 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 DCLRE1BQ9H816 532 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 SMPD3Q9NY59 655 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 MYEF2Q9P2K5 600 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 WARS2Q9UGM6 360 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 LAMP5Q9UJQ1 280 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 STARD10Q9Y365 291 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 GMPPBQ9Y5P6 360 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 ABCA1O95477 2261 aa10.89□□□□□ -0.67
CDK5RAP3-203ENST00000577442 SNTNA6NMZ2 147 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 PHYHO14832 338 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 TIMM8AO60220 97 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 SSX4O60224 188 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 MPZL2O60487 215 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 KITLGP21583 273 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 MPV17P39210 176 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 ELF3P78545 371 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 MAD2L1BPQ15013 274 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 MEDAGQ5VYS4 303 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 KCTD18Q6PI47 426 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 FBXW12Q6X9E4 464 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 COLCA1Q6ZS62 124 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 SPATC1Q76KD6 591 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 ZNF283Q8N7M2 679 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 ASB17Q8WXJ9 295 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 MBOAT4Q96T53 435 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 OPA3Q9H6K4 179 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 NIPAL2Q9H841 368 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 HAO2Q9NYQ3 351 aa10.88□□□□□ -0.67
CDK5RAP3-203ENST00000577442 VPS13CQ709C8 3753 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 C17orf100A8MU93 164 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 E9PQ18 207 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 H0YHG0 523 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 MRPL3P09001 348 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 H2BFMP0C1H6 154 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 SELEP16581 610 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 ALOX5APP20292 161 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 PEX2P28328 305 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 HTR1FP30939 366 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 OPRL1P41146 370 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 CX3CR1P49238 355 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 PDLIM4P50479 330 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 PRKXP51817 358 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 SNRPGP62308 76 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 RSPO1Q2MKA7 263 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 FAM209AQ5JX71 171 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 ZNF555Q8NEP9 628 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 THEM6Q8WUY1 208 aa10.87□□□□□ -0.67
CDK5RAP3-203ENST00000577442 FAM168AQ92567 244 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms