RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 LHX4Q969G2 390 aa8.24□□□□□ -1.09
CALCOCO2-227ENST00000575560 ERGIC1Q969X5 290 aa8.24□□□□□ -1.09
CALCOCO2-227ENST00000575560 C7orf26Q96N11 449 aa8.24□□□□□ -1.09
CALCOCO2-227ENST00000575560 DPAGT1Q9H3H5 408 aa8.24□□□□□ -1.09
CALCOCO2-227ENST00000575560 TMEM100Q9NV29 134 aa8.24□□□□□ -1.09
CALCOCO2-227ENST00000575560 TMCC3Q9ULS5 477 aa8.24□□□□□ -1.09
CALCOCO2-227ENST00000575560 NDUFAF1Q9Y375 327 aa8.24□□□□□ -1.09
CALCOCO2-227ENST00000575560 COL7A1Q02388 2944 aa8.24□□□□□ -1.09
CALCOCO2-227ENST00000575560 TEX13CA0A0J9YWL9 993 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 ZNF816-ZNF321PA0A0X1KG74 233 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 H7C1C5 153 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 PIN1P1O15428 100 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 FAM20BO75063 409 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 FCN3O75636 299 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 PRB2P02812 416 aaPredicted RBP8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 HLA-DPB1P04440 258 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 IFI30P13284 250 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 IRF2P14316 349 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 FUT4P22083 530 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 FPR3P25089 353 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 OR1E2P47887 323 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 RAD23AP54725 363 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 LSM6P62312 80 aaKnown RBP8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 LCN6P62502 163 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 HIST1H3AP68431 136 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 HOXA4Q00056 320 aaPredicted RBP8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 MPPED2Q15777 294 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 RSPO1Q2MKA7 263 aaPredicted RBP8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 ANKDD1AQ495B1 522 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 HIST2H3PS2Q5TEC6 136 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 METTL11BQ5VVY1 283 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 COLCA1Q6ZS62 124 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 HIST2H3AQ71DI3 136 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 PNLDC1Q8NA58 520 aaKnown RBP8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 FAM156AQ8NDB6 213 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 BHLHE23Q8NDY6 225 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 OR51A7Q8NH64 312 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 LRTOMTQ8WZ04 291 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 APOBEC3DQ96AK3 386 aaPredicted RBP8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 TECTBQ96PL2 329 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 NKIRAS1Q9NYS0 192 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 ERVK-18Q9QC07 812 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 ATPIF1Q9UII2 106 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 BAG5Q9UL15 447 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 A4GNTQ9UNA3 340 aa8.23□□□□□ -1.09
CALCOCO2-227ENST00000575560 TRAV27A0A087WT01 109 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 PRSS37A4D1T9 235 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 RER1O15258 196 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 CTLA4P16410 223 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 ZNF26P17031 533 aaPredicted RBP8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 CD200P41217 278 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 MAGOHP61326 146 aaKnown RBP8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 ARF6P62330 175 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 PRKCDQ05655 676 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 ST3GAL3Q11203 375 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 KCNJ8Q15842 424 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 FAM189A2Q15884 450 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 KCNMB1Q16558 191 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 C11orf91Q3C1V1 193 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 MESTQ5EB52 335 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 OTPQ5XKR4 325 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 FAM122BQ7Z309 247 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 OAFQ86UD1 273 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 OR11L1Q8NGX0 322 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 PARD6BQ9BYG5 372 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 RASSF4Q9H2L5 321 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 RABEP2Q9H5N1 569 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 WDR76Q9H967 626 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 SMURF1Q9HCE7 757 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 GRHPRQ9UBQ7 328 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 ADAM18Q9Y3Q7 739 aa8.22□□□□□ -1.09
CALCOCO2-227ENST00000575560 LGALS8O00214 317 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 NDUFA2O43678 99 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 PTBP3O95758 552 aaKnown RBP8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 CD14P08571 375 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 TGFBR2P37173 567 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 SLC9A3P48764 834 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 EGR3Q06889 387 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 GK2Q14410 553 aaPredicted RBP8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 KRTAP27-1Q3LI81 207 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 SFRP4Q6FHJ7 346 aaPredicted RBP8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 DHRS7BQ6IAN0 325 aaPredicted RBP8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 SLC35E4Q6ICL7 350 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 NANOGP8Q6NSW7 305 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 CALHM3Q86XJ0 350 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 GLB1L2Q8IW92 636 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 NRMQ8IXM6 262 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 MICU2Q8IYU8 434 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 SCCPDHQ8NBX0 429 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 NPRL2Q8WTW4 380 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 TSPEARQ8WU66 669 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 TLCD1Q96CP7 247 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 Q96M85 177 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 ECSITQ9BQ95 431 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 HCAR1Q9BXC0 346 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 MMADHCQ9H3L0 296 aaPredicted RBP8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 CNTD2Q9H8S5 307 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 NMNAT1Q9HAN9 279 aaPredicted RBP8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 UFSP2Q9NUQ7 469 aa8.21□□□□□ -1.1
CALCOCO2-227ENST00000575560 ZNRD1Q9P1U0 126 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms