RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 FAM209AQ5JX71 171 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 C1orf146Q5VVC0 180 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 SLX4IPQ5VYV7 408 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 DCXRQ7Z4W1 244 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 AMIGO2Q86SJ2 522 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 C1orf174Q8IYL3 243 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 ALDH16A1Q8IZ83 802 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 PROKR2Q8NFJ6 384 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 OR5K1Q8NHB7 308 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 TEX47Q8TBZ9 253 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 UBASH3BQ8TF42 649 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 RNF133Q8WVZ7 376 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 PYDC1Q8WXC3 89 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 HAVCR1Q96D42 359 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 MSI2Q96DH6 328 aaKnown RBP7.35□□□□□ -1.23
SMG6-216ENST00000575176 CIB1Q99828 191 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 PIMREGQ9BSJ6 248 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 RAB1BQ9H0U4 201 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 KCNN2Q9H2S1 579 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 MS4A5Q9H3V2 200 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 CHODLQ9H9P2 273 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 MSL2Q9HCI7 577 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 SLCO1C1Q9NYB5 712 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 ZNF319Q9P2F9 582 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 OAZ3Q9UMX2 235 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 IQCF6A8MYZ5 107 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 FAM157AC9JC47 383 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 H3BN98 237 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 PRODHO43272 600 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 SELENOFO60613 162 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 GLCEO94923 617 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 PTBP3O95758 552 aaKnown RBP7.34□□□□□ -1.23
SMG6-216ENST00000575176 RAC2P15153 192 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 ZNF3P17036 446 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 POLR2IP36954 125 aaKnown RBP7.34□□□□□ -1.23
SMG6-216ENST00000575176 OPRL1P41146 370 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 CRYBB2P43320 205 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 RASSF2P50749 326 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 ZNF81P51508 661 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 CRISP1P54107 249 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 RAD23AP54725 363 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 GGTLC2Q14390 218 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 GK2Q14410 553 aaPredicted RBP7.34□□□□□ -1.23
SMG6-216ENST00000575176 PTGES3Q15185 160 aaKnown RBP7.34□□□□□ -1.23
SMG6-216ENST00000575176 NKPD1Q17RQ9 610 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 ZNF718Q3SXZ3 478 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 AADACL4Q5VUY2 407 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 PLBD1Q6P4A8 553 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 DPY19L4Q7Z388 723 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 BCDIN3DQ7Z5W3 292 aaKnown RBP7.34□□□□□ -1.23
SMG6-216ENST00000575176 ICA1LQ8NDH6 482 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 CLDND2Q8NHS1 167 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 DNAJC9Q8WXX5 260 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 RDH5Q92781 318 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 SPSB4Q96A44 273 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 APOBEC3DQ96AK3 386 aaPredicted RBP7.34□□□□□ -1.23
SMG6-216ENST00000575176 CMBLQ96DG6 245 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 PKP2Q99959 881 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 SLC30A2Q9BRI3 323 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 ELOVL3Q9HB03 270 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 PAPOLBQ9NRJ5 636 aaKnown RBP7.34□□□□□ -1.23
SMG6-216ENST00000575176 PTTG3PQ9NZH4 202 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.34□□□□□ -1.23
SMG6-216ENST00000575176 CGGBP1Q9UFW8 167 aaPredicted RBP7.34□□□□□ -1.23
SMG6-216ENST00000575176 COPS3Q9UNS2 423 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 AP4S1Q9Y587 144 aa7.34□□□□□ -1.23
SMG6-216ENST00000575176 WNK2Q9Y3S1 2297 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 RIIAD1A6NNX1 92 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 ZNF878C9JN71 531 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 H0YL77 283 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 M0R135 149 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 E2F6O75461 281 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 CRLF1O75462 422 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 SRSF10O75494 262 aaKnown RBP7.33□□□□□ -1.24
SMG6-216ENST00000575176 IGLV3-1P01715 115 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 IGHV2-70P01814 119 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 ALPLP05186 524 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 SPARCP09486 303 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 SELEP16581 610 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 TUBG1P23258 451 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 GSTT1P30711 240 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 RGS6P49758 472 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 MMP16P51512 607 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 CDH15P55291 814 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 ESRRGP62508 458 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 HOXA4Q00056 320 aaPredicted RBP7.33□□□□□ -1.24
SMG6-216ENST00000575176 ZNF92Q03936 586 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 PCGF3Q3KNV8 242 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 GLYATL3Q5SZD4 288 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 OR2T2Q6IF00 324 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 TMEM154Q6P9G4 183 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 USP51Q70EK9 711 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 CPOQ8IVL8 374 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 ZNF283Q8N7M2 679 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 ATG16L2Q8NAA4 619 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 OR10AD1Q8NGE0 317 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 OR6K6Q8NGW6 343 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 OR2AE1Q8NHA4 323 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 OTOSQ8NHW6 89 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 RNF166Q96A37 237 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms