RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 INPP4BO15327 924 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 PRKYO43930 277 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 LDOC1O95751 146 aaPredicted RBP4.09□□□□□ -1.75
TSR1-203ENST00000575049 ACTL6AO96019 429 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 NGFP01138 241 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 HOXD4P09016 255 aaPredicted RBP4.09□□□□□ -1.75
TSR1-203ENST00000575049 TFPTP0C1Z6 253 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 SMIM10L1P0DMW3 83 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 MYOGP15173 224 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 SERPINB5P36952 375 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 CDKN2AP42771 156 aaKnown RBP4.09□□□□□ -1.75
TSR1-203ENST00000575049 EIF2B2P49770 351 aaKnown RBP4.09□□□□□ -1.75
TSR1-203ENST00000575049 CSRP3P50461 194 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 RPL14P50914 215 aaKnown RBP4.09□□□□□ -1.75
TSR1-203ENST00000575049 CCR8P51685 355 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 PRKXP51817 358 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 FBXW4P57775 412 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 DSTNP60981 165 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 PSME3P61289 254 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 ARL16Q0P5N6 197 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 TRAF2Q12933 501 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 STX5Q13190 355 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 ZBTB6Q15916 424 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 NRF1Q16656 503 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 VWA2Q5GFL6 755 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 COQ5Q5HYK3 327 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 TMEM31Q5JXX7 168 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 SPANXN3Q5MJ09 141 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 TPRG1LQ5T0D9 272 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 FAM45BPQ6NSW5 357 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 APOOLQ6UXV4 268 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 PGAP1Q75T13 922 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 NUFIP2Q7Z417 695 aaKnown RBP4.09□□□□□ -1.75
TSR1-203ENST00000575049 CEACAM19Q7Z692 300 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 RBM23Q86U06 439 aaKnown RBP4.09□□□□□ -1.75
TSR1-203ENST00000575049 OR4Q3Q8NH05 313 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 FAM45AQ8TCE6 357 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 PCNPQ8WW12 178 aaKnown RBP4.09□□□□□ -1.75
TSR1-203ENST00000575049 IL1F10Q8WWZ1 152 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 MRPS31Q92665 395 aaKnown RBP4.09□□□□□ -1.75
TSR1-203ENST00000575049 RAB3CQ96E17 227 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 SMIM10Q96HG1 83 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 CELF6Q96J87 481 aaKnown RBP4.09□□□□□ -1.75
TSR1-203ENST00000575049 SLC45A3Q96JT2 553 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 LYZL4Q96KX0 146 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 UTP23Q9BRU9 249 aaKnown RBP4.09□□□□□ -1.75
TSR1-203ENST00000575049 DCUN1D5Q9BTE7 237 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 CALN1Q9BXU9 219 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 CHRNA10Q9GZZ6 450 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 GAREM1Q9H706 876 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 WDR54Q9H977 334 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 NANOGQ9H9S0 305 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.09□□□□□ -1.75
TSR1-203ENST00000575049 AGPAT4Q9NRZ5 378 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 CISHQ9NSE2 258 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 THUMPD1Q9NXG2 353 aaKnown RBP4.09□□□□□ -1.75
TSR1-203ENST00000575049 KCNG2Q9UJ96 466 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 NTNG1Q9Y2I2 539 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 MRPS28Q9Y2Q9 187 aaKnown RBP4.09□□□□□ -1.75
TSR1-203ENST00000575049 MRPS18CQ9Y3D5 142 aaKnown RBP4.09□□□□□ -1.75
TSR1-203ENST00000575049 CPQQ9Y646 472 aa4.09□□□□□ -1.75
TSR1-203ENST00000575049 COL5A3P25940 1745 aaPredicted RBP4.09□□□□□ -1.76
TSR1-203ENST00000575049 FOCADQ5VW36 1801 aa4.09□□□□□ -1.76
TSR1-203ENST00000575049 SBF2Q86WG5 1849 aa4.09□□□□□ -1.76
TSR1-203ENST00000575049 TMEM150BA6NC51 233 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 STRCP1A6NGW2 1772 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 HACD1B0YJ81 288 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 CLDN25C9JDP6 229 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 H3BN98 237 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 M0QXV9 152 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 GPR171O14626 319 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 PRMT5O14744 637 aaPredicted RBP4.08□□□□□ -1.76
TSR1-203ENST00000575049 PRKNO60260 465 aaPredicted RBP4.08□□□□□ -1.76
TSR1-203ENST00000575049 CCNE2O96020 404 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 LGALS2P05162 132 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 GP1BAP07359 652 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 SLC35E2BP0CK96 405 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 CD1EP15812 388 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 SERPINA2P20848 420 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 KDELR2P33947 212 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 SPRP35270 261 aaPredicted RBP4.08□□□□□ -1.76
TSR1-203ENST00000575049 YAP1P46937 504 aaKnown RBP4.08□□□□□ -1.76
TSR1-203ENST00000575049 GSSP48637 474 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 PCYT1AP49585 367 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 HOXA1P49639 335 aaPredicted RBP4.08□□□□□ -1.76
TSR1-203ENST00000575049 ATP4BP51164 291 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 PITPNAQ00169 270 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 CHRNB3Q05901 458 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 ZNF154Q13106 437 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 SPCS2Q15005 226 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 KCNJ8Q15842 424 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 ATP6AP1Q15904 470 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 ZIC1Q15915 447 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 ZNF773Q6PK81 442 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 NRAPQ86VF7 1730 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 ZNF786Q8N393 782 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 MTURNQ8N3F0 131 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 LIX1Q8N485 282 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 IQCF1Q8N6M8 205 aa4.08□□□□□ -1.76
TSR1-203ENST00000575049 NECAP1Q8NC96 275 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms