RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ABHD12BQ7Z5M8 362 aaPredicted RBP12.42□□□□□ -0.42
VPS33B-208ENST00000574755 ADGRE4PQ86SQ3 457 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 OR1J2Q8NGS2 313 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 KCNE4Q8WWG9 221 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 TMEM54Q969K7 222 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 ADAT3Q96EY9 351 aaPredicted RBP12.42□□□□□ -0.42
VPS33B-208ENST00000574755 SFXN2Q96NB2 322 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 SORCS2Q96PQ0 1159 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 GPR87Q9BY21 358 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 NELFAQ9H3P2 528 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 DEPPQ9NTK1 212 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 LOC390937A0A1W2PQ73 354 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 SMAD9O15198 467 aaKnown RBP12.42□□□□□ -0.42
VPS33B-208ENST00000574755 CD37P11049 281 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 GDF1P27539 372 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 BDKRB2P30411 391 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 CX3CR1P49238 355 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 RAC3P60763 192 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 LSM6P62312 80 aaKnown RBP12.42□□□□□ -0.42
VPS33B-208ENST00000574755 FCN2Q15485 313 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 C10orf128Q5T292 105 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 ZNF813Q6ZN06 617 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 TMEM123Q8N131 208 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 OR5D14Q8NGL3 314 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 PNPLA2Q96AD5 504 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 FOXRED1Q96CU9 486 aaPredicted RBP12.42□□□□□ -0.42
VPS33B-208ENST00000574755 CDC6Q99741 560 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 RBM24Q9BX46 236 aaKnown RBP12.42□□□□□ -0.42
VPS33B-208ENST00000574755 OR51J1Q9H342 316 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 BEX1Q9HBH7 125 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 TMEM9BQ9NQ34 198 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 LRFN1Q9P244 771 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 MYEF2Q9P2K5 600 aaKnown RBP12.42□□□□□ -0.42
VPS33B-208ENST00000574755 C21orf140B9A014 251 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 H7C417 338 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 DNPH1O43598 174 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 PEX14O75381 377 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 ALDOBP05062 364 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 CARD18P57730 90 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 GRB2P62993 217 aaKnown RBP12.41□□□□□ -0.42
VPS33B-208ENST00000574755 WIPI1Q5MNZ9 446 aaPredicted RBP12.41□□□□□ -0.42
VPS33B-208ENST00000574755 OLFML2AQ68BL7 652 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 SPINK14Q6IE38 97 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 GGNQ86UU5 652 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 LRRC18Q8N456 261 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 ZNF283Q8N7M2 679 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 BEST4Q8NFU0 473 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 OR8B12Q8NGG6 310 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 OR4D6Q8NGJ1 314 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 ZNF775Q96BV0 537 aaPredicted RBP12.41□□□□□ -0.42
VPS33B-208ENST00000574755 ULBP2Q9BZM5 246 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 TMEM138Q9NPI0 162 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 MTFP1Q9UDX5 166 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 FLVCR2Q9UPI3 526 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 BOLA1Q9Y3E2 137 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 NCOA6Q14686 2063 aaPredicted RBP12.41□□□□□ -0.42
VPS33B-208ENST00000574755 C1QBP02746 253 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 ZNF806P0C7X5 589 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 ZNF20P17024 532 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 PRSS3P35030 304 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 GUCA2AQ02747 115 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 CDK10Q15131 360 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 GFOD2Q3B7J2 385 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 ELFN2Q5R3F8 820 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 C1orf100Q5SVJ3 147 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 ZNF627Q7L945 461 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 ZIC4Q8N9L1 334 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 OR1M1Q8NGA1 313 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 OR52N4Q8NGI2 321 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 SF3B5Q9BWJ5 86 aaKnown RBP12.41□□□□□ -0.42
VPS33B-208ENST00000574755 OR10A4Q9H209 315 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 CNTD2Q9H8S5 307 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 TAS2R8Q9NYW2 309 aa12.41□□□□□ -0.42
VPS33B-208ENST00000574755 A0A1B0GTI1 187 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 MEIS3P1A6NDR6 274 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 DHHO43323 396 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 GABRA1P14867 456 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 RAB3AP20336 220 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 ERP29P30040 261 aaKnown RBP12.4□□□□□ -0.42
VPS33B-208ENST00000574755 FAUP35544 74 aaKnown RBP12.4□□□□□ -0.42
VPS33B-208ENST00000574755 STARP49675 285 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 VEGFCP49767 419 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 FAPQ12884 760 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 HES3Q5TGS1 186 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 OR10K2Q6IF99 312 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 FAM57BQ71RH2 274 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 GJC3Q8NFK1 279 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 OR13C9Q8NGT0 318 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 GPR84Q9NQS5 396 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 PLSCR3Q9NRY6 295 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 FOXD3Q9UJU5 478 aaPredicted RBP12.4□□□□□ -0.42
VPS33B-208ENST00000574755 ZNF222Q9UK12 451 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 SLC5A6Q9Y289 635 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 KNTC1P50748 2209 aa12.4□□□□□ -0.42
VPS33B-208ENST00000574755 PINLYPA6NC86 204 aa12.4□□□□□ -0.43
VPS33B-208ENST00000574755 FAM172BPA6NC97 362 aa12.4□□□□□ -0.43
VPS33B-208ENST00000574755 SMLR1H3BR10 107 aa12.4□□□□□ -0.43
VPS33B-208ENST00000574755 CSF1P09603 554 aa12.4□□□□□ -0.43
VPS33B-208ENST00000574755 CNR1P21554 472 aa12.4□□□□□ -0.43
VPS33B-208ENST00000574755 ZNF133P52736 654 aaPredicted RBP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms