RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 PCNX1Q96RV3 2341 aa20.94■□□□□ 0.94
ATPAF1-213ENST00000574428 TRBV2A0A0J9YWF9 115 aa20.93■□□□□ 0.94
ATPAF1-213ENST00000574428 TMEM269A0A1B0GVZ9 245 aa20.93■□□□□ 0.94
ATPAF1-213ENST00000574428 FAM90A27PA6NNH2 459 aa20.93■□□□□ 0.94
ATPAF1-213ENST00000574428 OGG1O15527 345 aa20.93■□□□□ 0.94
ATPAF1-213ENST00000574428 HOXB1P14653 301 aaPredicted RBP20.93■□□□□ 0.94
ATPAF1-213ENST00000574428 APEX1P27695 318 aaKnown RBP20.93■□□□□ 0.94
ATPAF1-213ENST00000574428 CX3CR1P49238 355 aa20.93■□□□□ 0.94
ATPAF1-213ENST00000574428 ECH1Q13011 328 aa20.93■□□□□ 0.94
ATPAF1-213ENST00000574428 MRPL28Q13084 256 aaKnown RBP20.93■□□□□ 0.94
ATPAF1-213ENST00000574428 ZNF829Q3KNS6 432 aaPredicted RBP20.93■□□□□ 0.94
ATPAF1-213ENST00000574428 DMKNQ6E0U4 476 aaPredicted RBP20.93■□□□□ 0.94
ATPAF1-213ENST00000574428 PRSS35Q8N3Z0 413 aa20.93■□□□□ 0.94
ATPAF1-213ENST00000574428 OR2G2Q8NGZ5 317 aa20.93■□□□□ 0.94
ATPAF1-213ENST00000574428 COQ7Q99807 217 aa20.93■□□□□ 0.94
ATPAF1-213ENST00000574428 NDUFB11Q9NX14 153 aa20.93■□□□□ 0.94
ATPAF1-213ENST00000574428 SLC22A1O15245 554 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 AGFG2O95081 481 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 SLC2A1P11166 492 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 CRYGSP22914 178 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 CCKARP32238 428 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 GDI2P50395 445 aaKnown RBP20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 PSMA6P60900 246 aaKnown RBP20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 VBP1P61758 197 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 ALKBH1Q13686 389 aaKnown RBP20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 WDR38Q5JTN6 314 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 ZNF584Q8IVC4 421 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 ZNF283Q8N7M2 679 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 HAVCR2Q8TDQ0 301 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 SPTSSAQ969W0 71 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 PPP1R14AQ96A00 147 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 SMIM19Q96E16 107 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 HDHD5Q9BXW7 423 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 ACTR6Q9GZN1 396 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 NIPAL2Q9H841 368 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 FAM206AQ9NX38 181 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 RALYQ9UKM9 306 aaKnown RBP20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 LOC110117498-PIK3R3F6TDL0 507 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 GADD45AP24522 165 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 DCTDP32321 178 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 UGT2B10P36537 528 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 KIR3DL2P43630 455 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 ZNF121P58317 390 aaPredicted RBP20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 RPS25P62851 125 aaKnown RBP20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 CDSNQ15517 529 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 SLC25A35Q3KQZ1 300 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 FDX2Q6P4F2 183 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 NAA40Q86UY6 237 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 NDNFQ8TB73 568 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 ASB5Q8WWX0 329 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 TMEM203Q969S6 136 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 MS4A3Q96HJ5 214 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 C4orf45Q96LM5 186 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 PDCD1LG2Q9BQ51 273 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 TMED9Q9BVK6 235 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 C1QTNF6Q9BXI9 259 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 SLC22A13Q9Y226 551 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 N6AMT1Q9Y5N5 214 aa20.92■□□□□ 0.94
ATPAF1-213ENST00000574428 PLPP2O43688 288 aa20.91■□□□□ 0.94
ATPAF1-213ENST00000574428 OTX1P32242 354 aaPredicted RBP20.91■□□□□ 0.94
ATPAF1-213ENST00000574428 ASCL1P50553 236 aa20.91■□□□□ 0.94
ATPAF1-213ENST00000574428 NCS1P62166 190 aa20.91■□□□□ 0.94
ATPAF1-213ENST00000574428 PLP2Q04941 152 aa20.91■□□□□ 0.94
ATPAF1-213ENST00000574428 ODF4Q2M2E3 257 aa20.91■□□□□ 0.94
ATPAF1-213ENST00000574428 MTFR2Q6P444 385 aa20.91■□□□□ 0.94
ATPAF1-213ENST00000574428 CATSPERDQ86XM0 798 aa20.91■□□□□ 0.94
ATPAF1-213ENST00000574428 IL17RDQ8NFM7 739 aa20.91■□□□□ 0.94
ATPAF1-213ENST00000574428 LILRB4Q8NHJ6 448 aa20.91■□□□□ 0.94
ATPAF1-213ENST00000574428 RPS4Y2Q8TD47 263 aa20.91■□□□□ 0.94
ATPAF1-213ENST00000574428 GHSRQ92847 366 aa20.91■□□□□ 0.94
ATPAF1-213ENST00000574428 PGLYRP3Q96LB9 341 aa20.91■□□□□ 0.94
ATPAF1-213ENST00000574428 ZNF75AQ96N20 296 aa20.91■□□□□ 0.94
ATPAF1-213ENST00000574428 LOC100509620A0A075B734 347 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 NKX2-6A6NCS4 301 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 M0R135 149 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 CELA3BP08861 270 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 CCL2P13500 99 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 ANOS1P23352 680 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 STOMP27105 288 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 SLC6A9P48067 706 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 MMP16P51512 607 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 HGFACQ04756 655 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 KRTAP27-1Q3LI81 207 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 MYPOPQ86VE0 399 aaPredicted RBP20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 STEAP2Q8NFT2 490 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 ZNF799Q96GE5 643 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 G6PC2Q9NQR9 355 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 OR52A1Q9UKL2 312 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 IQCMA0A1B0GVH7 501 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 C16orf97H3BN30 126 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 AIREO43918 545 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 ZFPL1O95159 310 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 IDH3GP51553 393 aaPredicted RBP20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 GPR50Q13585 617 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 TIMM23BQ5SRD1 257 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 BCL2L15Q5TBC7 163 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 CA5BP1Q8WTZ4 195 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 SLC24A3Q9HC58 644 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 OBP2BQ9NPH6 170 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 ATPIF1Q9UII2 106 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms