RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 SEMG1P04279 462 aa17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 FPR3P25089 353 aa17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 MSX2P35548 267 aaPredicted RBP17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 SRP9P49458 86 aaKnown RBP17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 COMPP49747 757 aaPredicted RBP17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 COX10Q12887 443 aa17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 ZNF154Q13106 437 aa17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 RBMS3Q6XE24 437 aaKnown RBP17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 CFAP77Q6ZQR2 320 aa17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 SLC26A10Q8NG04 563 aa17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 ZNF420Q8TAQ5 688 aaPredicted RBP17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 POP5Q969H6 163 aaKnown RBP17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 NSMCE2Q96MF7 247 aa17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 PITX2Q99697 317 aa17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 MRI1Q9BV20 369 aa17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 CDADC1Q9BWV3 514 aa17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 HCAR1Q9BXC0 346 aa17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 PLA2G12AQ9BZM1 189 aa17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 NSRP1Q9H0G5 558 aaKnown RBP17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 FN3KQ9H479 309 aa17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 TMCC3Q9ULS5 477 aa17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 PPIAL4AQ9Y536 164 aa17.76■□□□□ 0.43
CHRNB1-206ENST00000574054 CEACAM18A8MTB9 384 aa17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 F5H5K5 113 aa17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 ARPC3O15145 178 aa17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 CYB5R3P00387 301 aaPredicted RBP17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 FABP3P05413 133 aa17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 ZNF12P17014 697 aa17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 IFNGR2P38484 337 aa17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 SLC36A3Q495N2 470 aa17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 SAMD4BQ5PRF9 694 aaKnown RBP17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 MOGAT3Q86VF5 341 aa17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 SIGLECL1Q8N7X8 197 aa17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 ZDHHC22Q8N966 263 aa17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 SDR9C7Q8NEX9 313 aa17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 OR2AJ1Q8NGZ0 328 aa17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 DVL3Q92997 716 aaPredicted RBP17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 NTN4Q9HB63 628 aa17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 DDX28Q9NUL7 540 aaKnown RBP17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 POLR3KQ9Y2Y1 108 aaPredicted RBP17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 INSIG2Q9Y5U4 225 aa17.75■□□□□ 0.43
CHRNB1-206ENST00000574054 IQCF6A8MYZ5 107 aa17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 F5H5P2 479 aa17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 ARPC2O15144 300 aa17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 SNX3O60493 162 aa17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 HSD17B1P14061 328 aa17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 RPS2P15880 293 aaKnown RBP17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 RRM2P31350 389 aa17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 PRSS12P56730 875 aa17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 UBA52P62987 128 aaKnown RBP17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 SLC18B1Q6NT16 456 aa17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 CPLX4Q7Z7G2 160 aa17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 ATF6BQ99941 703 aa17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 SLC30A2Q9BRI3 323 aa17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 TMEM100Q9NV29 134 aa17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 ZNF69Q9UC07 566 aa17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 NUP50Q9UKX7 468 aa17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 LRCH1Q9Y2L9 728 aa17.74■□□□□ 0.43
CHRNB1-206ENST00000574054 LRRC30A6NM36 301 aa17.73■□□□□ 0.43
CHRNB1-206ENST00000574054 A8MXK9 166 aa17.73■□□□□ 0.43
CHRNB1-206ENST00000574054 MLNRO43193 412 aa17.73■□□□□ 0.43
CHRNB1-206ENST00000574054 ACSM4P0C7M7 580 aa17.73■□□□□ 0.43
CHRNB1-206ENST00000574054 SELEP16581 610 aa17.73■□□□□ 0.43
CHRNB1-206ENST00000574054 TRAP1Q12931 704 aaKnown RBP17.73■□□□□ 0.43
CHRNB1-206ENST00000574054 ECH1Q13011 328 aa17.73■□□□□ 0.43
CHRNB1-206ENST00000574054 RSPO1Q2MKA7 263 aaPredicted RBP17.73■□□□□ 0.43
CHRNB1-206ENST00000574054 SLC35F1Q5T1Q4 408 aa17.73■□□□□ 0.43
CHRNB1-206ENST00000574054 PGAM4Q8N0Y7 254 aa17.73■□□□□ 0.43
CHRNB1-206ENST00000574054 GNPDA2Q8TDQ7 276 aa17.73■□□□□ 0.43
CHRNB1-206ENST00000574054 CDRT15Q96T59 188 aa17.73■□□□□ 0.43
CHRNB1-206ENST00000574054 C1QTNF5Q9BXJ0 243 aa17.73■□□□□ 0.43
CHRNB1-206ENST00000574054 OR6C68A6NDL8 312 aa17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 IDH3BO43837 385 aa17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 LCATP04180 440 aa17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 HLA-DPB1P04440 258 aa17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 GSSP48637 474 aa17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 MALLQ13021 153 aa17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 KLF17Q5JT82 389 aaPredicted RBP17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 CLEC12AQ5QGZ9 265 aa17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 ZNF620Q6ZNG0 422 aa17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 COLCA1Q6ZS62 124 aa17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 ZBTB46Q86UZ6 589 aa17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 KLBQ86Z14 1044 aa17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 ZDHHC21Q8IVQ6 265 aa17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 OR52E2Q8NGJ4 325 aa17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 ZMYND19Q96E35 227 aaPredicted RBP17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 DUX5Q96PT3 197 aa17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 SSBP3Q9BWW4 388 aaPredicted RBP17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 CYB5R1Q9UHQ9 305 aa17.72■□□□□ 0.43
CHRNB1-206ENST00000574054 WNT2P09544 360 aa17.71■□□□□ 0.43
CHRNB1-206ENST00000574054 TSPAN31Q12999 210 aa17.71■□□□□ 0.43
CHRNB1-206ENST00000574054 GK2Q14410 553 aaPredicted RBP17.71■□□□□ 0.43
CHRNB1-206ENST00000574054 KRTAP27-1Q3LI81 207 aa17.71■□□□□ 0.43
CHRNB1-206ENST00000574054 PGBD2Q6P3X8 592 aa17.71■□□□□ 0.43
CHRNB1-206ENST00000574054 NAA40Q86UY6 237 aa17.71■□□□□ 0.43
CHRNB1-206ENST00000574054 C1orf87Q8N0U7 546 aa17.71■□□□□ 0.43
CHRNB1-206ENST00000574054 OR52L1Q8NGH7 329 aa17.71■□□□□ 0.43
CHRNB1-206ENST00000574054 EGLN3Q9H6Z9 239 aa17.71■□□□□ 0.43
CHRNB1-206ENST00000574054 TMEM165Q9HC07 324 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms