RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 TSLPQ969D9 159 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 ZNF524Q96C55 264 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 CNTNAP3BQ96NU0 1288 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 KLHDC3Q9BQ90 382 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 ZNF629Q9UEG4 869 aaPredicted RBP9.63□□□□□ -0.87
CCDC40-207ENST00000572253 SYT7O43581 403 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 CX3CR1P49238 355 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 ARL4DP49703 201 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 CORO6Q6QEF8 472 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 TMEM92Q6UXU6 159 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 TTLL10Q6ZVT0 673 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 LINC00346Q8IVM7 164 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 PAQR8Q8TEZ7 354 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 RELTQ969Z4 430 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 ADIPOR1Q96A54 375 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 SCGB3A2Q96PL1 93 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 TREM1Q9NP99 234 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 PIAS3Q9Y6X2 628 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 RAB27BO00194 218 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 CRHP06850 196 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 OR52W1Q6IF63 320 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 RAB11FIP2Q7L804 512 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 BAP18Q8IXM2 172 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 ZNF101Q8IZC7 436 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 OR1M1Q8NGA1 313 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 ZNF285Q96NJ3 590 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 CNTD2Q9H8S5 307 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 G6PC2Q9NQR9 355 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 LANCL2Q9NS86 450 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 CUTCQ9NTM9 273 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 KCNK7Q9Y2U2 307 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 CSAG2Q9Y5P2 127 aa9.63□□□□□ -0.87
CCDC40-207ENST00000572253 MPZL1O95297 269 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 PGAM2P15259 253 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 ZNF20P17024 532 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 SERPINF1P36955 418 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 CCR5P51681 352 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 EIF5AP63241 154 aaKnown RBP9.62□□□□□ -0.87
CCDC40-207ENST00000572253 GVQW1Q8N7I0 195 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 OR5D14Q8NGL3 314 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 C5orf34Q96MH7 638 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 UQCC2Q9BRT2 126 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 SELENOIQ9C0D9 397 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 OR11A1Q9GZK7 315 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 TMEM184BQ9Y519 407 aaPredicted RBP9.62□□□□□ -0.87
CCDC40-207ENST00000572253 GPR31O00270 319 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 SNAPINO95295 136 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 GABRG2P18507 467 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 GSK3AP49840 483 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 PNLIPRP2P54317 469 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 EBPQ15125 230 aaKnown RBP9.62□□□□□ -0.87
CCDC40-207ENST00000572253 FAM189A2Q15884 450 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 AWAT2Q6E213 333 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 PGAP1Q75T13 922 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 SLC26A10Q8NG04 563 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 OR5AP2Q8NGF4 316 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 OR4K15Q8NH41 348 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 STOML3Q8TAV4 291 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 CMBLQ96DG6 245 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 PIK3IP1Q96FE7 263 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 KIF26BQ2KJY2 2108 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 TLCD2A6NGC4 264 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 CHRM2P08172 466 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 OR1D4P47884 311 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 NAAAQ02083 359 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 ACTBL2Q562R1 376 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 NKAPLQ5M9Q1 402 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 ZNF721Q8TF20 911 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 RTN4RQ9BZR6 473 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 FAM117AQ9C073 453 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 POLR1DQ9Y2S0 133 aa9.62□□□□□ -0.87
CCDC40-207ENST00000572253 TEX13DA0A0J9YY54 714 aaPredicted RBP9.61□□□□□ -0.87
CCDC40-207ENST00000572253 EFSO43281 561 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 TSPAN2O60636 221 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 MTRF1O75570 445 aaKnown RBP9.61□□□□□ -0.87
CCDC40-207ENST00000572253 DDAH2O95865 285 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 IGKV3-11P04433 115 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 IGHV4-34P06331 123 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 EMP2P54851 167 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 OR10R2Q8NGX6 335 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 NMES1Q9C002 83 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 WBP1LQ9NX94 342 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 SLC5A6Q9Y289 635 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 NUP210LQ5VU65 1888 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 LINC01565O15544 149 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 NPIPB7O75200 414 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 PMP2P02689 132 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 AKR1C2P52895 323 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 AKR1C1Q04828 323 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 EIF5AL1Q6IS14 154 aaKnown RBP9.61□□□□□ -0.87
CCDC40-207ENST00000572253 COMMD2Q86X83 199 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 C7orf61Q8IZ16 206 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 PUSL1Q8N0Z8 303 aaKnown RBP9.61□□□□□ -0.87
CCDC40-207ENST00000572253 GPR119Q8TDV5 335 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 LRRC61Q9BV99 259 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 A0A0B4J2A0 478 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 LILRA5A6NI73 299 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 SRSF10O75494 262 aaKnown RBP9.61□□□□□ -0.87
CCDC40-207ENST00000572253 GNB3P16520 340 aa9.61□□□□□ -0.87
CCDC40-207ENST00000572253 MMP16P51512 607 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms