RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 MAP6Q96JE9 813 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 DIRC2Q96SL1 478 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 FEVQ99581 238 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 ATF6BQ99941 703 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 ZNF665Q9H7R5 613 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 PNRC2Q9NPJ4 139 aaKnown RBP15.07■□□□□ 0
CTDNEP1-207ENST00000572043 TUBG2Q9NRH3 451 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 HIF1ANQ9NWT6 349 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 ATPIF1Q9UII2 106 aa15.07■□□□□ 0
CTDNEP1-207ENST00000572043 NIPBLQ6KC79 2804 aaeCLIP15.07■□□□□ 0
CTDNEP1-207ENST00000572043 CHD3Q12873 2000 aaKnown RBP15.06■□□□□ 0
CTDNEP1-207ENST00000572043 IGHV3-64DA0A0J9YX35 117 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 MSMBP08118 114 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 CD55P08174 381 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 ADH4P08319 380 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 SPARCP09486 303 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 ACSM4P0C7M7 580 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 RAC2P15153 192 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 TNFSF4P23510 183 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 DVL1P1P54792 670 aaPredicted RBP15.06■□□□□ 0
CTDNEP1-207ENST00000572043 SRSF2Q01130 221 aaKnown RBP15.06■□□□□ 0
CTDNEP1-207ENST00000572043 ZNF511Q8NB15 262 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 BHLHE23Q8NDY6 225 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 OR6K6Q8NGW6 343 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 TEX47Q8TBZ9 253 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 ITLN1Q8WWA0 313 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 RAB1CQ92928 201 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 GAL3ST1Q99999 423 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 UBAP1Q9NZ09 502 aa15.06■□□□□ 0
CTDNEP1-207ENST00000572043 PDP1Q9P0J1 537 aaPredicted RBP15.06■□□□□ 0
CTDNEP1-207ENST00000572043 TLN2Q9Y4G6 2542 aa15.05■□□□□ 0
CTDNEP1-207ENST00000572043 RNF212BA8MTL3 300 aa15.05■□□□□ -0
CTDNEP1-207ENST00000572043 E2F6O75461 281 aa15.05■□□□□ -0
CTDNEP1-207ENST00000572043 DNAJC8O75937 253 aaPredicted RBP15.05■□□□□ -0
CTDNEP1-207ENST00000572043 LCATP04180 440 aa15.05■□□□□ -0
CTDNEP1-207ENST00000572043 POU1F1P28069 291 aa15.05■□□□□ -0
CTDNEP1-207ENST00000572043 SRP14P37108 136 aaKnown RBP15.05■□□□□ -0
CTDNEP1-207ENST00000572043 HS3ST5Q8IZT8 346 aa15.05■□□□□ -0
CTDNEP1-207ENST00000572043 OR10AD1Q8NGE0 317 aa15.05■□□□□ -0
CTDNEP1-207ENST00000572043 TMEM186Q96B77 213 aa15.05■□□□□ -0
CTDNEP1-207ENST00000572043 ZNF582Q96NG8 517 aaPredicted RBP15.05■□□□□ -0
CTDNEP1-207ENST00000572043 RBM4Q9BWF3 364 aaKnown RBP15.05■□□□□ -0
CTDNEP1-207ENST00000572043 MED20Q9H944 212 aa15.05■□□□□ -0
CTDNEP1-207ENST00000572043 BAIAP2Q9UQB8 552 aa15.05■□□□□ -0
CTDNEP1-207ENST00000572043 COMMD3-BMI1R4GMX3 469 aa15.05■□□□□ -0
CTDNEP1-207ENST00000572043 FAM183AA6NL82 134 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 RIIAD1A6NNX1 92 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 H0YL77 283 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 PHF1O43189 567 aaPredicted RBP15.04■□□□□ -0
CTDNEP1-207ENST00000572043 IFNGP01579 166 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 SPI1P17947 270 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 FMO3P31513 532 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 CBX1P83916 185 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 ECH1Q13011 328 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 KRTAP27-1Q3LI81 207 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 FBXW12Q6X9E4 464 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 SPATC1Q76KD6 591 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 CXXC5Q7LFL8 322 aaKnown RBP15.04■□□□□ -0
CTDNEP1-207ENST00000572043 DCXRQ7Z4W1 244 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 PEG10Q86TG7 708 aaKnown RBP15.04■□□□□ -0
CTDNEP1-207ENST00000572043 OR10S1Q8NGN2 331 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 OR51F2Q8NH61 342 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 OR2V2Q96R30 315 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 C1QTNF5Q9BXJ0 243 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 CENPMQ9NSP4 180 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 TMEM106BQ9NUM4 274 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 KCNG2Q9UJ96 466 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 POMPQ9Y244 141 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 N6AMT1Q9Y5N5 214 aa15.04■□□□□ -0
CTDNEP1-207ENST00000572043 J3QW42 95 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 M0R135 149 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 ZNF593O00488 134 aaPredicted RBP15.03■□□□□ -0
CTDNEP1-207ENST00000572043 FKBP6O75344 327 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 IGHV2-5P01817 119 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 SBK2P0C263 348 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 ZNF3P17036 446 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 PRKACGP22612 351 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 SLC6A9P48067 706 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 SLC25A1P53007 311 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 TPTEP56180 551 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 SLC3A1Q07837 685 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 ACSM5Q6NUN0 579 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 FAHD2BQ6P2I3 314 aaPredicted RBP15.03■□□□□ -0
CTDNEP1-207ENST00000572043 OR8G5Q8NG78 346 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 SLCO4A1Q96BD0 722 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 RAB39BQ96DA2 213 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 ZNF799Q96GE5 643 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 FAHD2AQ96GK7 314 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 COPS4Q9BT78 406 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 HCAR1Q9BXC0 346 aa15.03■□□□□ -0
CTDNEP1-207ENST00000572043 ABCA2Q9BZC7 2435 aa15.02■□□□□ -0
CTDNEP1-207ENST00000572043 DEAF1O75398 565 aaPredicted RBP15.02■□□□□ -0
CTDNEP1-207ENST00000572043 HLA-DPB1P04440 258 aa15.02■□□□□ -0
CTDNEP1-207ENST00000572043 TNFRSF1AP19438 455 aa15.02■□□□□ -0
CTDNEP1-207ENST00000572043 ENTPD1P49961 510 aa15.02■□□□□ -0
CTDNEP1-207ENST00000572043 PRKXP51817 358 aa15.02■□□□□ -0
CTDNEP1-207ENST00000572043 MALLQ13021 153 aa15.02■□□□□ -0
CTDNEP1-207ENST00000572043 GK3PQ14409 553 aa15.02■□□□□ -0
CTDNEP1-207ENST00000572043 GK2Q14410 553 aaPredicted RBP15.02■□□□□ -0
CTDNEP1-207ENST00000572043 TAF13Q15543 124 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms