RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 IGKV1-8A0A0C4DH67 115 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 A0A0G2JN53 185 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 A0A1W2PR80 420 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 A0A1W2PRF3 423 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 A0A1W2PRM7 423 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 FEZF1A0PJY2 475 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 ANKUB1A6NFN9 424 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 CCDC160A6NGH7 325 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 VSTM2BA6NLU5 285 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 EIF4E1BA6NMX2 242 aaKnown RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 GJE1A6NN92 205 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 OR11H12B2RN74 326 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 C10orf142B7Z368 130 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 C4orf51C9J302 202 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 LOC110117498-PIK3R3F6TDL0 507 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 BLOC1S5-TXNDC5H3BN57 136 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 SULT1C2O00338 296 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 KPNA4O00629 521 aaPredicted RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 ACOT8O14734 319 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 RGS14O43566 566 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 MRPS14O60783 128 aaKnown RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 EEDO75530 441 aaKnown RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 SOX30O94993 753 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 SEMA4FO95754 770 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 TBX6O95947 436 aaPredicted RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 ORM1P02763 201 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 WNT1P04628 370 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 IGHV4-34P06331 123 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 SMIM18P0DKX4 95 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 ERGP11308 486 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 EPXP11678 715 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 BCKDHAP12694 445 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 HSD17B1P14061 328 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 HOXB9P17482 250 aaPredicted RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 NDUFB7P17568 137 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 TBXA2RP21731 343 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 BCKDHBP21953 392 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 HRH2P25021 359 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 GABRA5P31644 462 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 RBM34P42696 430 aaKnown RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 DNASE1L1P49184 302 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 EIF2B2P49770 351 aaKnown RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 CRYBA4P53673 196 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 TMBIM6P55061 237 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 PCBP4P57723 403 aaKnown RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 MTPNP58546 118 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 PPP1CAP62136 330 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 EMX2Q04743 252 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 PUDPQ08623 228 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 ASAH1Q13510 395 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 C1orf61Q13536 156 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 DOC2BQ14184 412 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 NFATC4Q14934 902 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 UBXN2BQ14CS0 331 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 RTP5Q14D33 572 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 CTU2Q2VPK5 515 aaKnown RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 HLA-BQ31612 363 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 LINC01620Q4KN68 170 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 SLC22A6Q4U2R8 563 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 RBM48Q5RL73 367 aaKnown RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 FRG2Q64ET8 278 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 KIAA0895LQ68EN5 471 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 TMEM200BQ69YZ2 307 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 NANOGP8Q6NSW7 305 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 ZNF836Q6ZNA1 936 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 RNF165Q6ZSG1 346 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 FAM220AQ7Z4H9 259 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 TMEM144Q7Z5S9 345 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 ZNF605Q86T29 641 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 PARGQ86W56 976 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 IFNEQ86WN2 208 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 CARM1Q86X55 608 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 ZNF761Q86XN6 746 aaPredicted RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 WDFY1Q8IWB7 410 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 MSRB3Q8IXL7 192 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 RIMKLAQ8IXN7 391 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 TMEFF1Q8IYR6 380 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 CLECL1Q8IZS7 167 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 JAGN1Q8N5M9 183 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 ATP6V1C2Q8NEY4 427 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 OR11H1Q8NG94 326 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 OR7A2PQ8NGA2 310 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 OR1L6Q8NGR2 347 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 OR9A2Q8NGT5 310 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 OR11H2Q8NH07 326 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 OR52I2Q8NH67 350 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 OR5K2Q8NHB8 316 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 C16orf78Q8WTQ4 265 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 CASTOR1Q8WTX7 329 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 TRUB1Q8WWH5 349 aaKnown RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 S100ZQ8WXG8 99 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 TFGQ92734 400 aaPredicted RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 TMEM203Q969S6 136 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 ISOC2Q96AB3 205 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 LRRC58Q96CX6 371 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 RAB39BQ96DA2 213 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 CMTM7Q96FZ5 175 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 AURKBQ96GD4 344 aaPredicted RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 SFRP2Q96HF1 295 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms