RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 RPS6KA3P51812 740 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 ZNF181Q2M3W8 571 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 FGD3Q5JSP0 725 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 FAM201AQ5SY85 155 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 SMARCD3Q6STE5 483 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 SHISA2Q6UWI4 295 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 MOGAT3Q86VF5 341 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 JAZF1Q86VZ6 243 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 KLBQ86Z14 1044 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 OR6V1Q8N148 313 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 FAM86B1Q8N7N1 296 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 OR52E2Q8NGJ4 325 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 TAF15Q92804 592 aaKnown RBP eCLIP12.36□□□□□ -0.43
NDE1-203ENST00000570727 ZNF582Q96NG8 517 aaPredicted RBP12.36□□□□□ -0.43
NDE1-203ENST00000570727 KCTD14Q9BQ13 255 aaPredicted RBP12.36□□□□□ -0.43
NDE1-203ENST00000570727 TMEM246Q9BRR3 403 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 MS4A7Q9GZW8 240 aaPredicted RBP12.36□□□□□ -0.43
NDE1-203ENST00000570727 ZNF696Q9H7X3 374 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 WDR76Q9H967 626 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 SRA1Q9HD15 236 aaKnown RBP12.36□□□□□ -0.43
NDE1-203ENST00000570727 ABCD2Q9UBJ2 740 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 OR5V1Q9UGF6 321 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 RPS6KA6Q9UK32 745 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 B9D1Q9UPM9 204 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 AURKCQ9UQB9 309 aa12.36□□□□□ -0.43
NDE1-203ENST00000570727 FAM32AQ9Y421 112 aaKnown RBP12.36□□□□□ -0.43
NDE1-203ENST00000570727 IGHV3OR16-10A0A075B7F0 116 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 KCNAB3O43448 404 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 FSTL3O95633 263 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 PPP1R3DO95685 299 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 PLATP00750 562 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 RNASE1P07998 156 aaKnown RBP12.35□□□□□ -0.43
NDE1-203ENST00000570727 CRABP1P29762 137 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 CENPAP49450 140 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 SRP9P49458 86 aaKnown RBP12.35□□□□□ -0.43
NDE1-203ENST00000570727 COX10Q12887 443 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 SLC9A3R2Q15599 337 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 GLYATQ6IB77 296 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 LRRN1Q6UXK5 716 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 C9orf139Q6ZV77 190 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.35□□□□□ -0.43
NDE1-203ENST00000570727 NAA40Q86UY6 237 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 BHLHE23Q8NDY6 225 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 OR52J3Q8NH60 311 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 RAB40AQ8WXH6 277 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 UPRTQ96BW1 309 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 ERMAPQ96PL5 475 aaPredicted RBP12.35□□□□□ -0.43
NDE1-203ENST00000570727 HDHD2Q9H0R4 259 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 ZMAT3Q9HA38 289 aaKnown RBP12.35□□□□□ -0.43
NDE1-203ENST00000570727 DCAF13Q9NV06 445 aaKnown RBP12.35□□□□□ -0.43
NDE1-203ENST00000570727 TMEM100Q9NV29 134 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 ZNF446Q9NWS9 450 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 MIOXQ9UGB7 285 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 POLR1DQ9Y2S0 133 aa12.35□□□□□ -0.43
NDE1-203ENST00000570727 IGHV2-70DA0A0C4DH43 119 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 KIR2DS1A0A191URI9 304 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 CLDN34H7C241 214 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 NDUFAB1O14561 156 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 CCDC22O60826 627 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 HLA-DPB1P04440 258 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 ACSM4P0C7M7 580 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 RPS2P15880 293 aaKnown RBP12.34□□□□□ -0.43
NDE1-203ENST00000570727 SELEP16581 610 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 MDH1P40925 334 aaKnown RBP12.34□□□□□ -0.43
NDE1-203ENST00000570727 NUDT2P50583 147 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 PRSS12P56730 875 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 PSME3P61289 254 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 GNB2P62879 340 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 MAB21L1Q13394 359 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 RFX4Q33E94 735 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 ZNF404Q494X3 552 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 PGM2L1Q6PCE3 622 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 LYPD2Q6UXB3 125 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 CFAP77Q6ZQR2 320 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 PARP8Q8N3A8 854 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 SLC26A10Q8NG04 563 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 NEIL1Q96FI4 390 aaPredicted RBP12.34□□□□□ -0.43
NDE1-203ENST00000570727 NMNAT3Q96T66 252 aa12.34□□□□□ -0.43
NDE1-203ENST00000570727 UNKLQ9H9P5 680 aaKnown RBP12.34□□□□□ -0.43
NDE1-203ENST00000570727 ARPC3O15145 178 aa12.33□□□□□ -0.44
NDE1-203ENST00000570727 HIST1H1CP16403 213 aaKnown RBP12.33□□□□□ -0.44
NDE1-203ENST00000570727 FPR3P25089 353 aa12.33□□□□□ -0.44
NDE1-203ENST00000570727 GATA4P43694 442 aa12.33□□□□□ -0.44
NDE1-203ENST00000570727 MTNR1AP48039 350 aa12.33□□□□□ -0.44
NDE1-203ENST00000570727 GK2Q14410 553 aaPredicted RBP12.33□□□□□ -0.44
NDE1-203ENST00000570727 SLC18B1Q6NT16 456 aa12.33□□□□□ -0.44
NDE1-203ENST00000570727 LEG1Q6P5S2 330 aa12.33□□□□□ -0.44
NDE1-203ENST00000570727 DNM1P34Q6PK57 102 aa12.33□□□□□ -0.44
NDE1-203ENST00000570727 BTNL3Q6UXE8 466 aa12.33□□□□□ -0.44
NDE1-203ENST00000570727 ZNF841Q6ZN19 808 aa12.33□□□□□ -0.44
NDE1-203ENST00000570727 ZBTB46Q86UZ6 589 aa12.33□□□□□ -0.44
NDE1-203ENST00000570727 LINC00346Q8IVM7 164 aa12.33□□□□□ -0.44
NDE1-203ENST00000570727 SLC25A28Q96A46 364 aa12.33□□□□□ -0.44
NDE1-203ENST00000570727 PLEKHA8Q96JA3 519 aa12.33□□□□□ -0.44
NDE1-203ENST00000570727 HCAR1Q9BXC0 346 aa12.33□□□□□ -0.44
NDE1-203ENST00000570727 PNRC2Q9NPJ4 139 aaKnown RBP12.33□□□□□ -0.44
NDE1-203ENST00000570727 MDFIC2A0A1B0GVS7 189 aa12.32□□□□□ -0.44
NDE1-203ENST00000570727 F5H5K5 113 aa12.32□□□□□ -0.44
NDE1-203ENST00000570727 SEMG1P04279 462 aa12.32□□□□□ -0.44
NDE1-203ENST00000570727 GGT2P36268 569 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms