RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 RSPO4Q2I0M5 234 aaPredicted RBP13.72□□□□□ -0.21
USP43-202ENST00000570475 C11orf87Q6NUJ2 197 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 GLIPR1L1Q6UWM5 242 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 GPX8Q8TED1 209 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 OR5B2Q96R09 309 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 NKX6-2Q9C056 277 aaPredicted RBP13.72□□□□□ -0.21
USP43-202ENST00000570475 CA14Q9ULX7 337 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 VSIG4Q9Y279 399 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 HMSDA8MTL9 139 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 SLC33A1O00400 549 aaPredicted RBP13.72□□□□□ -0.21
USP43-202ENST00000570475 B3GALNT1O75752 331 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.72□□□□□ -0.21
USP43-202ENST00000570475 EXOSC6Q5RKV6 272 aaKnown RBP13.72□□□□□ -0.21
USP43-202ENST00000570475 TMEM244Q5VVB8 128 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 FAM57BQ71RH2 274 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 CBLN2Q8IUK8 224 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 C8orf44Q96CB5 159 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 NICN1Q9BSH3 213 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 LAT2Q9GZY6 243 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 RAB3AP20336 220 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 CLDN6P56747 220 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 CSNK2A1P68400 391 aaPredicted RBP13.72□□□□□ -0.21
USP43-202ENST00000570475 SGCBQ16585 318 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 PRAMEF20Q5VT98 475 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 SPAG16Q8N0X2 631 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 CSNK2A3Q8NEV1 391 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 OR2I1PQ8NGU4 316 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 FAM96BQ9Y3D0 163 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 SERPINA5P05154 406 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 MGMTP16455 207 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 SERPINA2P20848 420 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 NME2P22392 152 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 EMC4Q5J8M3 183 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 ZNF684Q5T5D7 378 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 PELOQ9BRX2 385 aaKnown RBP13.71□□□□□ -0.21
USP43-202ENST00000570475 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.71□□□□□ -0.21
USP43-202ENST00000570475 GAREM1Q9H706 876 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 HS3ST3A1Q9Y663 406 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 TEX13DA0A0J9YY54 714 aaPredicted RBP13.71□□□□□ -0.21
USP43-202ENST00000570475 FAM221BA6H8Z2 402 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 VSTM2BA6NLU5 285 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 OR2T1O43869 369 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 CNR1P21554 472 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 IL32P24001 234 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 CSF2RBP32927 897 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 RBM39Q14498 530 aaKnown RBP13.71□□□□□ -0.21
USP43-202ENST00000570475 CSRP2Q16527 193 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 OR5D14Q8NGL3 314 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 TMEM234Q8WY98 164 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 MCHR2Q969V1 340 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 WDR77Q9BQA1 342 aaPredicted RBP13.71□□□□□ -0.21
USP43-202ENST00000570475 FBRSQ9HAH7 460 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 ASH2LQ9UBL3 628 aa13.71□□□□□ -0.21
USP43-202ENST00000570475 CACNA1EQ15878 2313 aa13.71□□□□□ -0.22
USP43-202ENST00000570475 TRBV5-7A0A0A0MS05 114 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 ZNF726A6NNF4 738 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 ICAM2P13598 275 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 MRPS21P82921 87 aaKnown RBP13.7□□□□□ -0.22
USP43-202ENST00000570475 EBPQ15125 230 aaKnown RBP13.7□□□□□ -0.22
USP43-202ENST00000570475 LRRC18Q8N456 261 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 OR51T1Q8NGJ9 327 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 TOMM40LQ969M1 308 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 SLAMF6Q96DU3 332 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 MRPS24Q96EL2 167 aaKnown RBP13.7□□□□□ -0.22
USP43-202ENST00000570475 REG4Q9BYZ8 158 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 DUSP15Q9H1R2 295 aaPredicted RBP13.7□□□□□ -0.22
USP43-202ENST00000570475 TRIOBPQ9H2D6 2365 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 CD38P28907 300 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 STK11Q15831 433 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 C9orf40Q8IXQ3 194 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 OR4K17Q8NGC6 315 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 MARC2Q969Z3 335 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 SOX7Q9BT81 388 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 S1PR5Q9H228 398 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 PPP4R1LQ9P1A2 415 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 GDF2Q9UK05 429 aaPredicted RBP13.7□□□□□ -0.22
USP43-202ENST00000570475 R4GMQ9 66 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 REV3LO60673 3130 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 A0A1W2PPC1 479 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 BGLAPP02818 100 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 DHPSP49366 369 aaPredicted RBP13.7□□□□□ -0.22
USP43-202ENST00000570475 ZNF41P51814 821 aaPredicted RBP13.7□□□□□ -0.22
USP43-202ENST00000570475 SLC26A5P58743 744 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 INPP5JQ15735 1006 aaPredicted RBP13.7□□□□□ -0.22
USP43-202ENST00000570475 TMPPEQ6ZT21 453 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 ACOT7LQ6ZUV0 252 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 LRRC75AQ8NAA5 344 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 SLC26A10Q8NG04 563 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 THRSPQ92748 146 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 RAB3CQ96E17 227 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 ARPC5LQ9BPX5 153 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 FGF21Q9NSA1 209 aa13.7□□□□□ -0.22
USP43-202ENST00000570475 MRPS28Q9Y2Q9 187 aaKnown RBP13.7□□□□□ -0.22
USP43-202ENST00000570475 NUP210Q8TEM1 1887 aaPredicted RBP13.69□□□□□ -0.22
USP43-202ENST00000570475 IGKV1D-43A0A0B4J1Z2 117 aa13.69□□□□□ -0.22
USP43-202ENST00000570475 ATG12O94817 140 aa13.69□□□□□ -0.22
USP43-202ENST00000570475 HEXBP07686 556 aa13.69□□□□□ -0.22
USP43-202ENST00000570475 H3F3CQ6NXT2 135 aa13.69□□□□□ -0.22
USP43-202ENST00000570475 CLEC9AQ6UXN8 241 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms