RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 FGFRL1Q8N441 504 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 OR8J3Q8NGG0 315 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 UBE2FQ969M7 185 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 ATP6V1G3Q96LB4 118 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 ZNF582Q96NG8 517 aaPredicted RBP10.02□□□□□ -0.81
CAPN3-220ENST00000569827 RBM4BQ9BQ04 359 aaKnown RBP10.02□□□□□ -0.81
CAPN3-220ENST00000569827 SLC30A2Q9BRI3 323 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 TMEM120AQ9BXJ8 343 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 SEMA6AQ9H2E6 1030 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 MMP27Q9H306 513 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 SMURF1Q9HCE7 757 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 INTS9Q9NV88 658 aaKnown RBP10.02□□□□□ -0.81
CAPN3-220ENST00000569827 RNF114Q9Y508 228 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 LHFPL6Q9Y693 200 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 CENPVL3A0A0U1RRI6 287 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 IQCF6A8MYZ5 107 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 FAM220BPB1ANY3 271 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 C3orf80F5H4A9 247 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 M0QZ24 198 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 DCTN6O00399 190 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 GPR137BO60478 399 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 KHDRBS3O75525 346 aaKnown RBP10.01□□□□□ -0.81
CAPN3-220ENST00000569827 FCN3O75636 299 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 ZNF682O95780 498 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 SELENOWP63302 87 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 ELF3P78545 371 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-220ENST00000569827 POU4F2Q12837 409 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 TRAM2Q15035 370 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 ZBED5Q49AG3 693 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 CLEC12AQ5QGZ9 265 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 ERICH5Q6P6B1 374 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 DCDC5Q6ZRR9 648 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 NAA40Q86UY6 237 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 GLB1L2Q8IW92 636 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 FAM110DQ8TAY7 271 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-220ENST00000569827 LHX4Q969G2 390 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 APOBEC3DQ96AK3 386 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-220ENST00000569827 NUAK2Q9H093 628 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 PRDM13Q9H4Q3 707 aa10.01□□□□□ -0.81
CAPN3-220ENST00000569827 A0A0U1RQK1 487 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 LOC100653049A0A140TA62 436 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 C5orf63A6NC05 138 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 LRRC30A6NM36 301 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 PHYHO14832 338 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 ENSAO43768 121 aaKnown RBP10□□□□□ -0.81
CAPN3-220ENST00000569827 KRT34O76011 436 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 TOX4O94842 621 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 NDUFA7O95182 113 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 IFNA14P01570 189 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 IFNW1P05000 195 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 IRF2P14316 349 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 MMP9P14780 707 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 DLX1P56177 255 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 RSPO1Q2MKA7 263 aaPredicted RBP10□□□□□ -0.81
CAPN3-220ENST00000569827 CFAP77Q6ZQR2 320 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 MBOAT2Q6ZWT7 520 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 PCYOX1LQ8NBM8 494 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 OR2T12Q8NG77 320 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 LINC01006Q8NI28 216 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 TSPEARQ8WU66 669 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 ACOT11Q8WXI4 607 aaPredicted RBP10□□□□□ -0.81
CAPN3-220ENST00000569827 FN3KQ9H479 309 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 TMEM100Q9NV29 134 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 DNAJB11Q9UBS4 358 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 IER3IP1Q9Y5U9 82 aa10□□□□□ -0.81
CAPN3-220ENST00000569827 IGHV3OR15-7A0A075B7D8 119 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 A0A1B0GUS0 222 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 A0A1B0GW55 424 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 ELOVL7A1L3X0 281 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 F5H5K5 113 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 IFNL4K9M1U5 179 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 TIMM23O14925 209 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 ADAM20O43506 726 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 EDF1O60869 148 aaKnown RBP9.99□□□□□ -0.81
CAPN3-220ENST00000569827 PPP1R3DO95685 299 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 PRB2P02812 416 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-220ENST00000569827 DUX4L2P0CJ85 424 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 DUX4L3P0CJ86 424 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 DUX4L4P0CJ87 422 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 DUX4L5P0CJ88 424 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 DUX4L6P0CJ89 424 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 DUX4L7P0CJ90 424 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 TUBG1P23258 451 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 CA6P23280 308 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 SDHAP31040 664 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 PSMB10P40306 273 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 CDKN2AP42771 156 aaKnown RBP9.99□□□□□ -0.81
CAPN3-220ENST00000569827 FXYD6P3P58550 94 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 LSM6P62312 80 aaKnown RBP9.99□□□□□ -0.81
CAPN3-220ENST00000569827 KLF10Q13118 480 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 GK2Q14410 553 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-220ENST00000569827 ZNF181Q2M3W8 571 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 ZNF362Q5T0B9 420 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-220ENST00000569827 DUX4L9Q6RFH8 374 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-220ENST00000569827 ZNF620Q6ZNG0 422 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 ZNF826PQ6ZT77 177 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 TSEN54Q7Z6J9 526 aaKnown RBP9.99□□□□□ -0.81
CAPN3-220ENST00000569827 C1orf87Q8N0U7 546 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 SCCPDHQ8NBX0 429 aa9.99□□□□□ -0.81
CAPN3-220ENST00000569827 OR5L1Q8NGL2 311 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms