RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 HPF1Q9NWY4 346 aa4.77□□□□□ -1.65
SF3B3-213ENST00000569687 FAM206AQ9NX38 181 aa4.77□□□□□ -1.65
SF3B3-213ENST00000569687 TAS2R8Q9NYW2 309 aa4.77□□□□□ -1.65
SF3B3-213ENST00000569687 GLTPQ9NZD2 209 aa4.77□□□□□ -1.65
SF3B3-213ENST00000569687 MTFP1Q9UDX5 166 aa4.77□□□□□ -1.65
SF3B3-213ENST00000569687 ZNF107Q9UII5 783 aaPredicted RBP4.77□□□□□ -1.65
SF3B3-213ENST00000569687 GDF2Q9UK05 429 aaPredicted RBP4.77□□□□□ -1.65
SF3B3-213ENST00000569687 EMC9Q9Y3B6 208 aa4.77□□□□□ -1.65
SF3B3-213ENST00000569687 RHBDD3Q9Y3P4 386 aa4.77□□□□□ -1.65
SF3B3-213ENST00000569687 LHFPL6Q9Y693 200 aa4.77□□□□□ -1.65
SF3B3-213ENST00000569687 EXPH5Q8NEV8 1989 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 MPDZO75970 2070 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 CCDC187A0A096LP49 1063 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 A0A0A6YYJ9 748 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 A0A0J9YW62 118 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 FAM172BPA6NC97 362 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 GGT3PA6NGU5 568 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 ADARB2-AS1A8MUL3 147 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 C9orf172C9J069 976 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 H0YC42 278 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 DOK2O60496 412 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 EIF4EBP3O60516 100 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-213ENST00000569687 PRAF2O60831 178 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 RAMP1O60894 148 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 CTAG2O75638 210 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 RBBP9O75884 186 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 TGM6O95932 706 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 WNT11O96014 354 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 MT-CO3P00414 261 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 IGLV3-1P01715 115 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 C1QBP02746 253 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 TTRP02766 147 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 OPN1LWP04000 364 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 P04436 131 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 ALDOBP05062 364 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 IL5P05113 134 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 YES1P07947 543 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 MELTFP08582 738 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 ITGA5P08648 1049 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 QDPRP09417 244 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 ACSM4P0C7M7 580 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 GABRA1P14867 456 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 CCL1P22362 96 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 HTR2CP28335 458 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 ERP29P30040 261 aaKnown RBP4.76□□□□□ -1.65
SF3B3-213ENST00000569687 SFTPDP35247 375 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 NBL1P41271 181 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 DNASE1L1P49184 302 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 SRP9P49458 86 aaKnown RBP4.76□□□□□ -1.65
SF3B3-213ENST00000569687 GSK3AP49840 483 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 GZMKP49863 264 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 CLDN12P56749 244 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 CLDN17P56750 224 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 GABREP78334 506 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 IFITM2Q01629 132 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 MAB21L1Q13394 359 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 TNK1Q13470 666 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 CSRP2Q16527 193 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 BCL2A1Q16548 175 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 GSG1Q2KHT4 349 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 ZFP69Q49AA0 526 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 ACER2Q5QJU3 275 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 BCL2L15Q5TBC7 163 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 PRAMEF20Q5VT98 475 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 ZNF813Q6ZN06 617 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 KRT74Q7RTS7 529 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 FGD2Q7Z6J4 655 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 ALPK2Q86TB3 2170 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 NOXA1Q86UR1 476 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 GLCCI1Q86VQ1 547 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 TMPRSS12Q86WS5 348 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 SERPINA12Q8IW75 414 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 C20orf196Q8IYI0 205 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 CPAMD8Q8IZJ3 1885 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 TMEM123Q8N131 208 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 BEST3Q8N1M1 668 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 NKAIN3Q8N8D7 197 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 DNAAF1Q8NEP3 725 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 GJC3Q8NFK1 279 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 OR9K2Q8NGE7 335 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 OR51D1Q8NGF3 324 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 OR2AJ1Q8NGZ0 328 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 UBASH3BQ8TF42 649 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 TSEN15Q8WW01 171 aaKnown RBP4.76□□□□□ -1.65
SF3B3-213ENST00000569687 AKAP1Q92667 903 aaKnown RBP eCLIP4.76□□□□□ -1.65
SF3B3-213ENST00000569687 TTC28Q96AY4 2481 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 ADGRG7Q96K78 797 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 IP6K3Q96PC2 410 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 MDFIQ99750 246 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 NUDT16L1Q9BRJ7 211 aaKnown RBP4.76□□□□□ -1.65
SF3B3-213ENST00000569687 UQCC2Q9BRT2 126 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 PBOV1Q9GZY1 135 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 SLCO5A1Q9H2Y9 848 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 OR51J1Q9H342 316 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 TP63Q9H3D4 680 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-213ENST00000569687 SCPEP1Q9HB40 452 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 RANGRFQ9HD47 186 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-213ENST00000569687 EMC7Q9NPA0 242 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 PARD6AQ9NPB6 346 aa4.76□□□□□ -1.65
SF3B3-213ENST00000569687 TMEM138Q9NPI0 162 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms