RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 OR5M8Q8NGP6 311 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 OR5K2Q8NHB8 316 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 DCUN1D4Q92564 292 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 DYRK2Q92630 601 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 SLC25A38Q96DW6 304 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 TECTBQ96PL2 329 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 SYT3Q9BQG1 590 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 ZNF700Q9H0M5 742 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 MTIF3Q9H2K0 278 aaKnown RBP9.78□□□□□ -0.84
CLK3-226ENST00000569406 PLSCR2Q9NRY7 297 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.78□□□□□ -0.84
CLK3-226ENST00000569406 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.78□□□□□ -0.84
CLK3-226ENST00000569406 K7ESM1 405 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 CD14P08571 375 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 DPP4P27487 766 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 AKT2P31751 481 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 DUSP8Q13202 625 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 TCEA2Q15560 299 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 PRSS53Q2L4Q9 553 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 TCEAL5Q5H9L2 206 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 EOGTQ5NDL2 527 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 CMTM4Q8IZR5 234 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 LGALS14Q8TCE9 139 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 DNAJA3Q96EY1 480 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 SLC35E1Q96K37 410 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 WWTR1Q9GZV5 400 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 PCED1AQ9H1Q7 454 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 PDE7BQ9NP56 450 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 HAO2Q9NYQ3 351 aa9.78□□□□□ -0.84
CLK3-226ENST00000569406 GSTZ1O43708 216 aaPredicted RBP9.77□□□□□ -0.85
CLK3-226ENST00000569406 CDC40O60508 579 aaKnown RBP eCLIP9.77□□□□□ -0.85
CLK3-226ENST00000569406 FCGR3AP08637 254 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 PNLIPP16233 465 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 RPL4P36578 427 aaKnown RBP9.77□□□□□ -0.85
CLK3-226ENST00000569406 RAB40BQ12829 278 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 ZNF311Q5JNZ3 666 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 LY6G6FQ5SQ64 297 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 C1orf194Q5T5A4 169 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 GRHL2Q6ISB3 625 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 BPIFA2Q96DR5 249 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 TMEM121BQ9BXQ6 578 aaPredicted RBP9.77□□□□□ -0.85
CLK3-226ENST00000569406 VPS29Q9UBQ0 182 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 PITPNC1Q9UKF7 332 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 WNT6Q9Y6F9 365 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 C1orf226A1L170 272 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 SERPINE3A8MV23 424 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 EEF1E1-BLOC1S5C9J1V9 151 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 TSPAN15O95858 294 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 NBEAP1P0C6P0 100 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 ACP2P11117 423 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 EFNA3P52797 238 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 NKPD1Q17RQ9 610 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 Q6ZRG5 221 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 PLPP5Q8NEB5 264 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 BBS1Q8NFJ9 593 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 BCL2L2Q92843 193 aaPredicted RBP9.77□□□□□ -0.85
CLK3-226ENST00000569406 RAB8BQ92930 207 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 TSLPQ969D9 159 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 ADIPOR1Q96A54 375 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 SMIM8Q96KF7 97 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 NRTNQ99748 197 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 RSPO3Q9BXY4 272 aaPredicted RBP9.77□□□□□ -0.85
CLK3-226ENST00000569406 ASB6Q9NWX5 421 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 CKAP5Q14008 2032 aa9.77□□□□□ -0.85
CLK3-226ENST00000569406 GABARAPH6UMI1 98 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 J3KRW8 73 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 TK1P04183 234 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 IMPA1P29218 277 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 SCARB2Q14108 478 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 OCIAD2Q56VL3 154 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 DPY19L2P2Q6ZN68 376 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 ZNF547Q8IVP9 402 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 STXBP6Q8NFX7 210 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 OR8S1Q8NH09 359 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 MFSD8Q8NHS3 518 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 SMPDL3AQ92484 453 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 SMPDL3BQ92485 455 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 MUCL1Q96DR8 90 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 PLSCR4Q9NRQ2 329 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 FBXO4Q9UKT5 387 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 SLC16A5O15375 505 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 RAMP1O60894 148 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 CH25HO95992 272 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 HSD3B2P26439 372 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 NPY4RP50391 375 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 CRMP1Q14194 572 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 CLEC12AQ5QGZ9 265 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 C1orf189Q5VU69 101 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 SMARCD3Q6STE5 483 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 PRICKLE2Q7Z3G6 844 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 GRINAQ7Z429 371 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 ALPK2Q86TB3 2170 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 FAM89BQ8N5H3 189 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 COMMD1Q8N668 190 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 SLC30A7Q8NEW0 376 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 OR4K17Q8NGC6 315 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 STACQ99469 402 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 SLC35A5Q9BS91 424 aa9.76□□□□□ -0.85
CLK3-226ENST00000569406 ISG20L2Q9H9L3 353 aaKnown RBP9.76□□□□□ -0.85
CLK3-226ENST00000569406 SLC5A6Q9Y289 635 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms