RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 RPRD1BQ9NQG5 326 aaKnown RBP12.26□□□□□ -0.45
CMTM3-215ENST00000568477 DNAJB9Q9UBS3 223 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 KLHL21Q9UJP4 597 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 PURGQ9UJV8 347 aaKnown RBP12.26□□□□□ -0.45
CMTM3-215ENST00000568477 RAB26Q9ULW5 256 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 B9D1Q9UPM9 204 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 STARD10Q9Y365 291 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 WIPI2Q9Y4P8 454 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 LYVE1Q9Y5Y7 322 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 LHFPL6Q9Y693 200 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 TNFRSF11BO00300 401 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 DENRO43583 198 aaKnown RBP12.25□□□□□ -0.45
CMTM3-215ENST00000568477 KITLGP21583 273 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 TNFSF4P23510 183 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 MAGEA2P43356 314 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 HMGA2P52926 109 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 HIST1H3AP68431 136 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 TNFAIP6P98066 277 aaPredicted RBP12.25□□□□□ -0.45
CMTM3-215ENST00000568477 MEP1BQ16820 701 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 SLC36A3Q495N2 470 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 HIST2H3PS2Q5TEC6 136 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 HIST2H3AQ71DI3 136 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 PHC2Q8IXK0 858 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 OR6V1Q8N148 313 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 SDR9C7Q8NEX9 313 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 SLC26A10Q8NG04 563 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 OR52L1Q8NGH7 329 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 NR1H4Q96RI1 486 aaPredicted RBP12.25□□□□□ -0.45
CMTM3-215ENST00000568477 COQ7Q99807 217 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 CIB1Q99828 191 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 ZNF665Q9H7R5 613 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 HIF1ANQ9NWT6 349 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 CDH10Q9Y6N8 788 aa12.25□□□□□ -0.45
CMTM3-215ENST00000568477 TRAV20A0A0B4J274 112 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 RPSAP08865 295 aaKnown RBP12.24□□□□□ -0.45
CMTM3-215ENST00000568477 DBHP09172 617 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 COX10Q12887 443 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 CDK5R2Q13319 367 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 CLEC12AQ5QGZ9 265 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 SLC35F1Q5T1Q4 408 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 ACSM5Q6NUN0 579 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 RPL13AP3Q6NVV1 102 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 CORO6Q6QEF8 472 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 ZBTB46Q86UZ6 589 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 GALNT4Q8N4A0 578 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 OR9Q2Q8NGE9 314 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 OR52E2Q8NGJ4 325 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 OR5L1Q8NGL2 311 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 PTP4A1Q93096 173 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 HAVCR1Q96D42 359 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 EGLN3Q9H6Z9 239 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 NTN4Q9HB63 628 aa12.24□□□□□ -0.45
CMTM3-215ENST00000568477 WNK2Q9Y3S1 2297 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 CUBNO60494 3623 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 ISPDA4D126 451 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 OR6C68A6NDL8 312 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 SAC3D1A6NKF1 404 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 CCNB2O95067 398 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 IGHV2-5P01817 119 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 HLA-DQA2P01906 255 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 RAC2P15153 192 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.23□□□□□ -0.45
CMTM3-215ENST00000568477 MED21Q13503 144 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 SHQ1Q6PI26 577 aaKnown RBP12.23□□□□□ -0.45
CMTM3-215ENST00000568477 PEG10Q86TG7 708 aaKnown RBP12.23□□□□□ -0.45
CMTM3-215ENST00000568477 LINC00346Q8IVM7 164 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 CBR4Q8N4T8 237 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 OR2Z1Q8NG97 314 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 OR4C15Q8NGM1 316 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 OR2AJ1Q8NGZ0 328 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 APOBEC3DQ96AK3 386 aaPredicted RBP12.23□□□□□ -0.45
CMTM3-215ENST00000568477 SLC29A1Q99808 456 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 GAL3ST1Q99999 423 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 CDADC1Q9BWV3 514 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 FN3KQ9H479 309 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 PTTG3PQ9NZH4 202 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 OAZ3Q9UMX2 235 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 SVEP1Q4LDE5 3571 aa12.23□□□□□ -0.45
CMTM3-215ENST00000568477 SURF4O15260 269 aa12.22□□□□□ -0.45
CMTM3-215ENST00000568477 CST1P01037 141 aa12.22□□□□□ -0.45
CMTM3-215ENST00000568477 TNFRSF1AP19438 455 aa12.22□□□□□ -0.45
CMTM3-215ENST00000568477 DBPQ10586 325 aaPredicted RBP12.22□□□□□ -0.45
CMTM3-215ENST00000568477 ECH1Q13011 328 aa12.22□□□□□ -0.45
CMTM3-215ENST00000568477 KRTAP24-1Q3LI83 254 aa12.22□□□□□ -0.45
CMTM3-215ENST00000568477 SPRNQ5BIV9 151 aa12.22□□□□□ -0.45
CMTM3-215ENST00000568477 ZNF770Q6IQ21 691 aaPredicted RBP12.22□□□□□ -0.45
CMTM3-215ENST00000568477 SLC18B1Q6NT16 456 aa12.22□□□□□ -0.45
CMTM3-215ENST00000568477 FBXW12Q6X9E4 464 aa12.22□□□□□ -0.45
CMTM3-215ENST00000568477 Q6ZR03 302 aa12.22□□□□□ -0.45
CMTM3-215ENST00000568477 RASSF6Q6ZTQ3 369 aa12.22□□□□□ -0.45
CMTM3-215ENST00000568477 PITX2Q99697 317 aa12.22□□□□□ -0.45
CMTM3-215ENST00000568477 REEP1Q9H902 201 aa12.22□□□□□ -0.45
CMTM3-215ENST00000568477 KCNG2Q9UJ96 466 aa12.22□□□□□ -0.45
CMTM3-215ENST00000568477 BHLHE40O14503 412 aa12.21□□□□□ -0.45
CMTM3-215ENST00000568477 GNGT2O14610 69 aa12.21□□□□□ -0.45
CMTM3-215ENST00000568477 GASTP01350 101 aa12.21□□□□□ -0.45
CMTM3-215ENST00000568477 GGT2P36268 569 aa12.21□□□□□ -0.45
CMTM3-215ENST00000568477 HLXQ14774 488 aaPredicted RBP12.21□□□□□ -0.45
CMTM3-215ENST00000568477 LIPNQ5VXI9 398 aa12.21□□□□□ -0.45
CMTM3-215ENST00000568477 OR2T5Q6IEZ7 315 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms