RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 CLDN18P56856 261 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 PSMA6P60900 246 aaKnown RBP12.89□□□□□ -0.35
COMMD4-221ENST00000567935 CEP78Q5JTW2 689 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 BCL2L15Q5TBC7 163 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 CNIH2Q6PI25 160 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 BAIAP2L2Q6UXY1 529 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 LINC00346Q8IVM7 164 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 CENPSQ8N2Z9 138 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 GJC3Q8NFK1 279 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 TSEN15Q8WW01 171 aaKnown RBP12.89□□□□□ -0.35
COMMD4-221ENST00000567935 OCEL1Q9H607 264 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 ABCB10Q9NRK6 738 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 CYSLTR2Q9NS75 346 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 CENPMQ9NSP4 180 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 PARPBPQ9NWS1 579 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 OR52A1Q9UKL2 312 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 FOXJ3Q9UPW0 622 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 V9GY05 133 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 TRAV17A0A0B4J275 112 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 FAM166BA8MTA8 275 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 HPGDSO60760 199 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 CEACAM4O75871 244 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 PNPP00491 289 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 OCMP0CE72 109 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-221ENST00000567935 RANBP1P43487 201 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 IFITM3Q01628 133 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 TAF13Q15543 124 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 ZNF79Q15937 498 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 NRN1LQ496H8 165 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 STEAP3Q658P3 488 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 STAC2Q6ZMT1 411 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 GPR137CQ8N3F9 429 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 TRMT10AQ8TBZ6 339 aaKnown RBP12.88□□□□□ -0.35
COMMD4-221ENST00000567935 TMEM106AQ96A25 262 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 LINC00470Q9BZP3 86 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 ZDHHC11Q9H8X9 412 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 GP6Q9HCN6 339 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 EMC7Q9NPA0 242 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 DDX28Q9NUL7 540 aaKnown RBP12.88□□□□□ -0.35
COMMD4-221ENST00000567935 CKLFQ9UBR5 152 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 SPATA2Q9UM82 520 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 DHDHQ9UQ10 334 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 EMC9Q9Y3B6 208 aa12.88□□□□□ -0.35
COMMD4-221ENST00000567935 MEGF11A6BM72 1044 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 IFITM5A6NNB3 132 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 ZNF724A8MTY0 619 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 FAM25AB3EWG3 89 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 FAM25CB3EWG5 89 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 FAM25GB3EWG6 89 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 H0YC42 278 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 CALCBP10092 127 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 CPN1P15169 458 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 HSD11B1P28845 292 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 NR4A2P43354 598 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 SELENOPP49908 381 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 CCL11P51671 97 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 OR10A3P58181 314 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 HIST1H3AP68431 136 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 SCN1BQ07699 218 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 MFGE8Q08431 387 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-221ENST00000567935 RNPS1Q15287 305 aaKnown RBP12.87□□□□□ -0.35
COMMD4-221ENST00000567935 HIST2H3PS2Q5TEC6 136 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 FAM27BQ5VT28 67 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 CORO6Q6QEF8 472 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 HIST2H3AQ71DI3 136 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 SPATC1Q76KD6 591 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 CHMP1BQ7LBR1 199 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-221ENST00000567935 MCEMP1Q8IX19 187 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 ELMOD2Q8IZ81 293 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 CCDC54Q8NEL0 328 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 FDCSPQ8NFU4 85 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 ZNF671Q8TAW3 534 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 ROBO4Q8WZ75 1007 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 SDHCQ99643 169 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-221ENST00000567935 SLC6A15Q9H2J7 730 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 G6PC2Q9NQR9 355 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 FAIMQ9NVQ4 179 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 FAM206AQ9NX38 181 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 ASH2LQ9UBL3 628 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 NUFIP1Q9UHK0 495 aaKnown RBP12.87□□□□□ -0.35
COMMD4-221ENST00000567935 ITGB1BP2Q9UKP3 347 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 GTF2A1LQ9UNN4 478 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 SLC22A13Q9Y226 551 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 AK6Q9Y3D8 172 aaKnown RBP12.87□□□□□ -0.35
COMMD4-221ENST00000567935 ETV7Q9Y603 341 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 NAV3Q8IVL0 2385 aa12.87□□□□□ -0.35
COMMD4-221ENST00000567935 TNRC6AQ8NDV7 1962 aaKnown RBP12.87□□□□□ -0.35
COMMD4-221ENST00000567935 TRGV5A0A0B4J1U4 118 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 A0A1B0GTH9 108 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 A0A1B0GVG6 124 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 A0A1W2PPK0 400 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 ANXA2P2A6NMY6 339 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 TPPPO94811 219 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 WNT11O96014 354 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 ANXA2P07355 339 aaKnown RBP12.86□□□□□ -0.35
COMMD4-221ENST00000567935 CELA3AP09093 270 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 CST2P09228 141 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 ATF1P18846 271 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 CDAP32320 146 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms