RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 IL20Q9NYY1 176 aa5.87□□□□□ -1.47
SF3B3-209ENST00000567635 PURGQ9UJV8 347 aaKnown RBP5.87□□□□□ -1.47
SF3B3-209ENST00000567635 LYVE1Q9Y5Y7 322 aa5.87□□□□□ -1.47
SF3B3-209ENST00000567635 LHFPL6Q9Y693 200 aa5.87□□□□□ -1.47
SF3B3-209ENST00000567635 CACNG2Q9Y698 323 aa5.87□□□□□ -1.47
SF3B3-209ENST00000567635 TRAV20A0A0B4J274 112 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 BHLHE40O14503 412 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 SURF4O15260 269 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 ATP6V1G2O95670 118 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 MSMBP08118 114 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 RPSAP08865 295 aaKnown RBP5.86□□□□□ -1.47
SF3B3-209ENST00000567635 DBHP09172 617 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 TNFRSF1AP19438 455 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 MAGEA2P43356 314 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 COX10Q12887 443 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 TRAP1Q12931 704 aaKnown RBP5.86□□□□□ -1.47
SF3B3-209ENST00000567635 PPP1R8Q12972 351 aaKnown RBP5.86□□□□□ -1.47
SF3B3-209ENST00000567635 TMED1Q13445 227 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 BLMHQ13867 455 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 HLXQ14774 488 aaPredicted RBP5.86□□□□□ -1.47
SF3B3-209ENST00000567635 MICAQ29983 383 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 SPRNQ5BIV9 151 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 CLEC12AQ5QGZ9 265 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 ZNF362Q5T0B9 420 aaPredicted RBP5.86□□□□□ -1.47
SF3B3-209ENST00000567635 OR2T5Q6IEZ7 315 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 SLC18B1Q6NT16 456 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 SLC27A4Q6P1M0 643 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 FBXW12Q6X9E4 464 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 Q6ZR03 302 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 RASSF6Q6ZTQ3 369 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 LINC00346Q8IVM7 164 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 OR2Z1Q8NG97 314 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 OR9Q2Q8NGE9 314 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 OR2T29Q8NH02 315 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 APOBEC3DQ96AK3 386 aaPredicted RBP5.86□□□□□ -1.47
SF3B3-209ENST00000567635 RAB39BQ96DA2 213 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 LRGUKQ96M69 825 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 DDOQ99489 341 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 PITX2Q99697 317 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 COQ7Q99807 217 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 EGLN3Q9H6Z9 239 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 REEP1Q9H902 201 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 LPAR2Q9HBW0 351 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 CYB5R1Q9UHQ9 305 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 KCNG2Q9UJ96 466 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 PRPF19Q9UMS4 504 aaKnown RBP5.86□□□□□ -1.47
SF3B3-209ENST00000567635 WIPI2Q9Y4P8 454 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 CDH10Q9Y6N8 788 aa5.86□□□□□ -1.47
SF3B3-209ENST00000567635 F5H5K5 113 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 IFNL4K9M1U5 179 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 ACOT8O14734 319 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 PLPP2O43688 288 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 DEAF1O75398 565 aaPredicted RBP5.85□□□□□ -1.47
SF3B3-209ENST00000567635 IGHV2-5P01817 119 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 SBK2P0C263 348 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 ACSM4P0C7M7 580 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 RAP2AP10114 183 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 ZNF823P16415 610 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 PYCR1P32322 319 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 GGT2P36268 569 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 RANBP1P43487 201 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 DBPQ10586 325 aaPredicted RBP5.85□□□□□ -1.47
SF3B3-209ENST00000567635 GK3PQ14409 553 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 KRTAP27-1Q3LI81 207 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 LIPNQ5VXI9 398 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 OR2T2Q6IF00 324 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 FAHD2BQ6P2I3 314 aaPredicted RBP5.85□□□□□ -1.47
SF3B3-209ENST00000567635 CD300LDQ6UXZ3 194 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 CFAP77Q6ZQR2 320 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 COLCA1Q6ZS62 124 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 NAA40Q86UY6 237 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 OR5AS1Q8N127 324 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 LNX2Q8N448 690 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 ATG16L2Q8NAA4 619 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 CYB561A3Q8NBI2 242 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 AQP11Q8NBQ7 271 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 SDR9C7Q8NEX9 313 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 PROKR2Q8NFJ6 384 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 OR8G5Q8NG78 346 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 OR13G1Q8NGZ3 307 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 OR2T4Q8NH00 348 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 ASB9Q96DX5 294 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 FAHD2AQ96GK7 314 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 ZNF582Q96NG8 517 aaPredicted RBP5.85□□□□□ -1.47
SF3B3-209ENST00000567635 ATF6BQ99941 703 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 TSSK6Q9BXA6 273 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 HCAR1Q9BXC0 346 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 C1QTNF5Q9BXJ0 243 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 DGCR6LQ9BY27 220 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 YIPF3Q9GZM5 350 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 FN3KQ9H479 309 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 PAPOLBQ9NRJ5 636 aaKnown RBP5.85□□□□□ -1.47
SF3B3-209ENST00000567635 TMEM106BQ9NUM4 274 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 TBC1D23Q9NUY8 699 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 TMEM100Q9NV29 134 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 MRPL22Q9NWU5 206 aaKnown RBP5.85□□□□□ -1.47
SF3B3-209ENST00000567635 VNN3Q9NY84 501 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 PTTG3PQ9NZH4 202 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 IL19Q9UHD0 177 aa5.85□□□□□ -1.47
SF3B3-209ENST00000567635 PCDHB10Q9UN67 800 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms