RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SCO1O75880 301 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 GP1BAP07359 652 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 HOXD4P09016 255 aaPredicted RBP14.95□□□□□ -0.02
CMTM3-213ENST00000566756 UBBP0CG47 229 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 SLC25A4P12235 298 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 MGMTP16455 207 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 HSD11B1P28845 292 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 GSK3AP49840 483 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 RPS27AP62979 156 aaKnown RBP14.95□□□□□ -0.02
CMTM3-213ENST00000566756 UBA52P62987 128 aaKnown RBP14.95□□□□□ -0.02
CMTM3-213ENST00000566756 ZNF345Q14585 488 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 MS4A18Q3C1V0 323 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 ATPAF1Q5TC12 328 aaPredicted RBP14.95□□□□□ -0.02
CMTM3-213ENST00000566756 ALKAL2Q6UX46 152 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 H1FNTQ75WM6 255 aaPredicted RBP14.95□□□□□ -0.02
CMTM3-213ENST00000566756 GALNT16Q8N428 558 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 OR5M8Q8NGP6 311 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 RNF133Q8WVZ7 376 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 CMKLR1Q99788 373 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 OR11A1Q9GZK7 315 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 ARRDC1-AS1Q9H2J1 176 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 SLC22A11Q9NSA0 550 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 FBLN5Q9UBX5 448 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 NPIPA1Q9UND3 350 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 RALGAPA1Q6GYQ0 2036 aa14.95□□□□□ -0.02
CMTM3-213ENST00000566756 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 D6RAR5 112 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 RAD1O60671 282 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 SCRG1O75711 98 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 POU3F2P20265 443 aaPredicted RBP14.94□□□□□ -0.02
CMTM3-213ENST00000566756 SORDQ00796 357 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 OC90Q02509 493 aaPredicted RBP14.94□□□□□ -0.02
CMTM3-213ENST00000566756 C17orf67Q0P5P2 114 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 DCXRQ7Z4W1 244 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 MDGA2Q7Z553 956 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.94□□□□□ -0.02
CMTM3-213ENST00000566756 BPIFB2Q8N4F0 458 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 ZDHHC22Q8N966 263 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 COQ8AQ8NI60 647 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 CXorf58Q96LI9 332 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 UQCC2Q9BRT2 126 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 SHARPINQ9H0F6 387 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 CGGBP1Q9UFW8 167 aaPredicted RBP14.94□□□□□ -0.02
CMTM3-213ENST00000566756 GDF2Q9UK05 429 aaPredicted RBP14.94□□□□□ -0.02
CMTM3-213ENST00000566756 MKL2Q9ULH7 1088 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 TRAV14DV4A0A0A6YYC5 116 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 TMEM269A0A1B0GVZ9 245 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 ETV2O00321 342 aaPredicted RBP14.94□□□□□ -0.02
CMTM3-213ENST00000566756 FGF5P12034 268 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 HOXD11P31277 338 aaPredicted RBP14.94□□□□□ -0.02
CMTM3-213ENST00000566756 UBE2MP61081 183 aaKnown RBP14.94□□□□□ -0.02
CMTM3-213ENST00000566756 ZFP36L1Q07352 338 aaKnown RBP14.94□□□□□ -0.02
CMTM3-213ENST00000566756 IL11RAQ14626 422 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 FAHD2BQ6P2I3 314 aaPredicted RBP14.94□□□□□ -0.02
CMTM3-213ENST00000566756 PAPD4Q6PIY7 484 aaKnown RBP14.94□□□□□ -0.02
CMTM3-213ENST00000566756 PPP1R3BQ86XI6 285 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 ZNF584Q8IVC4 421 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 JAGN1Q8N5M9 183 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 OR51A2Q8NGJ7 313 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 FAHD2AQ96GK7 314 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 TINAGL1Q9GZM7 467 aaPredicted RBP14.94□□□□□ -0.02
CMTM3-213ENST00000566756 DNTTIP1Q9H147 329 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 KLHL13Q9P2N7 655 aa14.94□□□□□ -0.02
CMTM3-213ENST00000566756 GPN3Q9UHW5 284 aaPredicted RBP14.94□□□□□ -0.02
CMTM3-213ENST00000566756 DCDC2BA2VCK2 349 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 OR2F2O95006 317 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 MPZL1O95297 269 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 TIAF1O95411 115 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 BPNT1O95861 308 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 TBPP20226 339 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 ACP1P24666 158 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 BDKRB2P30411 391 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 RNF4P78317 190 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 OR2F1Q13607 317 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 ZNF260Q3ZCT1 412 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 NKAIN1Q4KMZ8 207 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 PLA2G2CQ5R387 149 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 OTPQ5XKR4 325 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 ZNF385CQ66K41 422 aaPredicted RBP14.93□□□□□ -0.02
CMTM3-213ENST00000566756 LIN54Q6MZP7 749 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 LRFN4Q6PJG9 635 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 ZNF813Q6ZN06 617 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 BEST3Q8N1M1 668 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 SLC38A9Q8NBW4 561 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 BVESQ8NE79 360 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 STEAP2Q8NFT2 490 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 OR13C8Q8NGS7 320 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 STT3BQ8TCJ2 826 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 DNAJA3Q96EY1 480 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 LINC00052Q96N35 136 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 SMOC1Q9H4F8 434 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 CHST11Q9NPF2 352 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 KLK13Q9UKR3 277 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 OR14I1A6ND48 311 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 H2BFMP0C1H6 154 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 HLA-DOBP13765 273 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 CD96P40200 585 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 SPOCK1Q08629 439 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 DHRS2Q13268 280 aa14.93□□□□□ -0.02
CMTM3-213ENST00000566756 SLC25A42Q86VD7 318 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms