RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 MYH15Q9Y2K3 1946 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 C2orf16Q68DN1 1984 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 CNTNAP5Q8WYK1 1306 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 PDCD11Q14690 1871 aaKnown RBP2.72□□□□□ -1.97
CHD9-216ENST00000565803 A0A096LPI6 279 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 TSPAN11A1L157 253 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 TMEM213A2RRL7 107 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 E9PQ18 207 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 SLC17A3O00476 420 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 TNFSF11O14788 317 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 MLNRO43193 412 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 KLRC4O43908 158 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 DCTN3O75935 186 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 EML2O95834 649 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 SMIM6P0DI80 62 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 CD36P16671 472 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 MAKP20794 623 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 FUT3P21217 361 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 KITLGP21583 273 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 CMPK1P30085 196 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 PPIFP30405 207 aaKnown RBP2.72□□□□□ -1.97
CHD9-216ENST00000565803 FGF9P31371 208 aaPredicted RBP2.72□□□□□ -1.97
CHD9-216ENST00000565803 HSPA9P38646 679 aaKnown RBP2.72□□□□□ -1.97
CHD9-216ENST00000565803 EMP1P54849 157 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 MAZP56270 477 aaKnown RBP2.72□□□□□ -1.97
CHD9-216ENST00000565803 TCTAP57738 103 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 GNG3P63215 75 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 MRPS6P82932 125 aaKnown RBP2.72□□□□□ -1.97
CHD9-216ENST00000565803 TFAMQ00059 246 aaKnown RBP2.72□□□□□ -1.97
CHD9-216ENST00000565803 TGFBR3Q03167 851 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 RELAQ04206 551 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 ATXN7L3Q14CW9 347 aaPredicted RBP2.72□□□□□ -1.97
CHD9-216ENST00000565803 QPRTQ15274 297 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 PHKG1Q16816 387 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 PRR27Q6MZM9 219 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 ANKRD54Q6NXT1 300 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 MED27Q6P2C8 311 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 DRAM2Q6UX65 266 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 ZNF730Q6ZMV8 503 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 GCNT7Q6ZNI0 430 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 OR2W3Q7Z3T1 314 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 PIP4P1Q86T03 277 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 CD163Q86VB7 1156 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 LGI3Q8N145 548 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 DNAJC22Q8N4W6 341 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 EXD3Q8N9H8 876 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 ZNF439Q8NDP4 499 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 ACVR1CQ8NER5 493 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 OR52H1Q8NGJ2 320 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 OR56B4Q8NH76 319 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 ITFG1Q8TB96 612 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 MBD3L1Q8WWY6 194 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 YIPF5Q969M3 257 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 SCMH1Q96GD3 660 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 C20orf173Q96LM9 149 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 SLC6A7Q99884 636 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 NMUR1Q9HB89 426 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 S100A14Q9HCY8 104 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 SPAG4Q9NPE6 437 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 SLC38A7Q9NVC3 462 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 ICAM5Q9UMF0 924 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 MOKQ9UQ07 419 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 SLC17A4Q9Y2C5 497 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 SNX24Q9Y343 169 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.72□□□□□ -1.97
CHD9-216ENST00000565803 PAM16Q9Y3D7 125 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 RNF115Q9Y4L5 304 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 OR51B4Q9Y5P0 310 aa2.72□□□□□ -1.97
CHD9-216ENST00000565803 USP34Q70CQ2 3546 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 KCNE1BA0A087WTH5 132 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 GXYLT2A0PJZ3 443 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 ANTXRLA6NF34 631 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 HACD1B0YJ81 288 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 H3BMQ9 156 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 FAM229AH3BQW9 127 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 TMX2-CTNND1H3BSU7 103 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 K7ERU9 68 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 TCF21O43680 179 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 GLSO94925 669 aaPredicted RBP2.71□□□□□ -1.98
CHD9-216ENST00000565803 VENTXO95231 258 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 HPRP00739 348 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 IL6RP08887 468 aaPredicted RBP2.71□□□□□ -1.98
CHD9-216ENST00000565803 DANCRP0C864 163 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 GP9P14770 177 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 AADACP22760 399 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 PROZP22891 400 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 CCR7P32248 378 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 IFNGR2P38484 337 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 CRYBB2P43320 205 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 CLDN17P56750 224 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 CKS1BP61024 79 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 PITX1P78337 314 aaPredicted RBP2.71□□□□□ -1.98
CHD9-216ENST00000565803 ELAVL2Q12926 359 aaKnown RBP2.71□□□□□ -1.98
CHD9-216ENST00000565803 ASAH1Q13510 395 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 SF3A2Q15428 464 aaKnown RBP2.71□□□□□ -1.98
CHD9-216ENST00000565803 CTF1Q16619 201 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 VMACQ2NL98 169 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 TNFAIP8L3Q5GJ75 292 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 ANKRD34AQ69YU3 496 aa2.71□□□□□ -1.98
CHD9-216ENST00000565803 OR4C11Q6IEV9 310 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms