RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 DLGAP1O14490 977 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 ZNF254O75437 659 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 ACSM4P0C7M7 580 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 FAM157BP0CG42 384 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 OPRL1P41146 370 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 PTH2RP49190 550 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 ROM1Q03395 351 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 TAF13Q15543 124 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 TESK1Q15569 626 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 LPCAT4Q643R3 524 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 FBXW12Q6X9E4 464 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 SPNS3Q6ZMD2 512 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 RFPL4BQ6ZWI9 263 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 OR10S1Q8NGN2 331 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 RHOXF1Q8NHV9 184 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 ZNF582Q96NG8 517 aaPredicted RBP14.34□□□□□ -0.11
RNF40-206ENST00000564260 CACNG6Q9BXT2 260 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 MRPL37Q9BZE1 423 aaKnown RBP14.34□□□□□ -0.11
RNF40-206ENST00000564260 RAB1BQ9H0U4 201 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 MYOZ1Q9NP98 299 aaPredicted RBP14.34□□□□□ -0.11
RNF40-206ENST00000564260 CLN6Q9NWW5 311 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 GRIP1Q9Y3R0 1128 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 PCDHGB1Q9Y5G3 927 aa14.34□□□□□ -0.11
RNF40-206ENST00000564260 HEATR1Q9H583 2144 aaKnown RBP14.33□□□□□ -0.11
RNF40-206ENST00000564260 TMEM129A0AVI4 362 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 ACOD1A6NK06 481 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 CYSRT1A8MQ03 144 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 F5H5K5 113 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 M0R233 179 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 SELENOFO60613 162 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 SBK2P0C263 348 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 OR2T7P0C7T2 308 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 RAC2P15153 192 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 SELEP16581 610 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 GABRB1P18505 474 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 HSD11B1P28845 292 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 ART1P52961 327 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 EGR3Q06889 387 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 MALLQ13021 153 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 RSPO1Q2MKA7 263 aaPredicted RBP14.33□□□□□ -0.12
RNF40-206ENST00000564260 GALNT4Q8N4A0 578 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 DHRSXQ8N5I4 330 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 OR52H1Q8NGJ2 320 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 OR2T27Q8NH04 317 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 KLF14Q8TD94 323 aaPredicted RBP14.33□□□□□ -0.12
RNF40-206ENST00000564260 SNX33Q8WV41 574 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 NEU4Q8WWR8 484 aaPredicted RBP14.33□□□□□ -0.12
RNF40-206ENST00000564260 DIRC2Q96SL1 478 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 MROQ9BYG7 248 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 ADGRL4Q9HBW9 690 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 ZNF391Q9UJN7 358 aa14.33□□□□□ -0.12
RNF40-206ENST00000564260 RRP9O43818 475 aaKnown RBP14.32□□□□□ -0.12
RNF40-206ENST00000564260 DBHP09172 617 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 CSF3P09919 207 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 H2BFMP0C1H6 154 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 KITLGP21583 273 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 CFL1P23528 166 aaKnown RBP14.32□□□□□ -0.12
RNF40-206ENST00000564260 RPS27P42677 84 aaKnown RBP14.32□□□□□ -0.12
RNF40-206ENST00000564260 MTNR1AP48039 350 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 ATP5J2P56134 94 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 DSCR9P59020 149 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 ACTC1P68032 377 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 ACTA1P68133 377 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 LRRC36Q1X8D7 754 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 PCGF3Q3KNV8 242 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 OTPQ5XKR4 325 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 TMEM154Q6P9G4 183 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.32□□□□□ -0.12
RNF40-206ENST00000564260 ENTHD1Q8IYW4 607 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 SLC25A40Q8TBP6 338 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 OR2J1Q9GZK6 312 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 RGCCQ9H4X1 137 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 DYNLRB1Q9NP97 96 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 CENPMQ9NSP4 180 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 NKIRAS2Q9NYR9 191 aa14.32□□□□□ -0.12
RNF40-206ENST00000564260 OTOGQ6ZRI0 2925 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 AKAP6Q13023 2319 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 DSCAMO60469 2012 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 CCDC168Q8NDH2 2452 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 A0A1W2PPW3 197 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 XRCC2O43543 280 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 F12P00748 615 aaPredicted RBP14.31□□□□□ -0.12
RNF40-206ENST00000564260 NGFP01138 241 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 ADH4P08319 380 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 PSKH1P11801 424 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 ATP6V1E1P36543 226 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 NAA10P41227 235 aaPredicted RBP14.31□□□□□ -0.12
RNF40-206ENST00000564260 EFNA4P52798 201 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 ADARB1P78563 741 aaKnown RBP14.31□□□□□ -0.12
RNF40-206ENST00000564260 DBPQ10586 325 aaPredicted RBP14.31□□□□□ -0.12
RNF40-206ENST00000564260 ZNF691Q5VV52 312 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 ZNF679Q8IYX0 411 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 THEM6Q8WUY1 208 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 SLC7A6Q92536 515 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 HAVCR1Q96D42 359 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 MRPL48Q96GC5 212 aaKnown RBP14.31□□□□□ -0.12
RNF40-206ENST00000564260 ADI1Q9BV57 179 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 DUSP13Q9UII6 198 aa14.31□□□□□ -0.12
RNF40-206ENST00000564260 PLSCR5A0PG75 271 aa14.3□□□□□ -0.12
RNF40-206ENST00000564260 IRGMA1A4Y4 181 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms