RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 PPA1Q15181 289 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 SOWAHCQ53LP3 525 aaPredicted RBP11.17□□□□□ -0.62
CLK3-214ENST00000564096 DMKNQ6E0U4 476 aaPredicted RBP11.17□□□□□ -0.62
CLK3-214ENST00000564096 ZNF704Q6ZNC4 412 aaPredicted RBP11.17□□□□□ -0.62
CLK3-214ENST00000564096 LIX1LQ8IVB5 337 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 ZNF808Q8N4W9 903 aaPredicted RBP11.17□□□□□ -0.62
CLK3-214ENST00000564096 MS4A15Q8N5U1 240 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 ZNF676Q8N7Q3 588 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 FAM169BQ8N8A8 192 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 ZFP41Q8N8Y5 198 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 SLC30A7Q8NEW0 376 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 OR52H1Q8NGJ2 320 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 OR2G2Q8NGZ5 317 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 OR5AK2Q8NH90 309 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 LILRB4Q8NHJ6 448 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 HSD17B8Q92506 261 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 RNASE6Q93091 150 aaKnown RBP11.17□□□□□ -0.62
CLK3-214ENST00000564096 BCL7BQ9BQE9 202 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 FAM192AQ9GZU8 254 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 OR10A2Q9H208 303 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 CDH20Q9HBT6 801 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 KCNJ16Q9NPI9 418 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 FAM206AQ9NX38 181 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 B3GNT2Q9NY97 397 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 NUFIP1Q9UHK0 495 aaKnown RBP11.17□□□□□ -0.62
CLK3-214ENST00000564096 ST6GALNAC2Q9UJ37 374 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 OR52A1Q9UKL2 312 aa11.17□□□□□ -0.62
CLK3-214ENST00000564096 ZNF503-AS2A6NEH8 195 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 E9PI62 339 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 J3QW42 95 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 OGG1O15527 345 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 IGKV3-15P01624 115 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 HLA-DPB1P04440 258 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 SERPINA5P05154 406 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 MAPK3P27361 379 aaPredicted RBP11.16□□□□□ -0.62
CLK3-214ENST00000564096 CCKARP32238 428 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 GTF2A1P52655 376 aaPredicted RBP11.16□□□□□ -0.62
CLK3-214ENST00000564096 SORDQ00796 357 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 SLC3A1Q07837 685 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 MFGE8Q08431 387 aaPredicted RBP11.16□□□□□ -0.62
CLK3-214ENST00000564096 FAM27E3Q08E93 113 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 C3orf36Q3SXR2 165 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 YIF1BQ5BJH7 314 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 WDR38Q5JTN6 314 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 XKRXQ6PP77 449 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 UNQ6126/PRO20091Q6UXV3 157 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 COMMD2Q86X83 199 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 CATSPERDQ86XM0 798 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 CLVS1Q8IUQ0 354 aaPredicted RBP11.16□□□□□ -0.62
CLK3-214ENST00000564096 ZNF420Q8TAQ5 688 aaPredicted RBP11.16□□□□□ -0.62
CLK3-214ENST00000564096 FGFBP3Q8TAT2 258 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 RAB2BQ8WUD1 216 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 YIPF6Q96EC8 236 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 PGAM5Q96HS1 289 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 PBOV1Q9GZY1 135 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 NOX3Q9HBY0 568 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 ZNF391Q9UJN7 358 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 STUB1Q9UNE7 303 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 SLC25A15Q9Y619 301 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 COL6A6A6NMZ7 2263 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 ALPK2Q86TB3 2170 aa11.16□□□□□ -0.62
CLK3-214ENST00000564096 A0A1W2PR80 420 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 C5orf49A4QMS7 147 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 SRSF10O75494 262 aaKnown RBP11.15□□□□□ -0.62
CLK3-214ENST00000564096 RGS9O75916 674 aaPredicted RBP11.15□□□□□ -0.62
CLK3-214ENST00000564096 GABARAPO95166 117 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 ACHEP22303 614 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 GALP22466 123 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 CCNOP22674 350 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 APEX1P27695 318 aaKnown RBP11.15□□□□□ -0.62
CLK3-214ENST00000564096 TGFBR2P37173 567 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 PEX19P40855 299 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 NANOS3P60323 173 aaKnown RBP11.15□□□□□ -0.62
CLK3-214ENST00000564096 SSX1Q16384 188 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 KRTAP27-1Q3LI81 207 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 TMEM244Q5VVB8 128 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 GPR107Q5VW38 600 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 PAMR1Q6UXH9 720 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 FAM57BQ71RH2 274 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 WDR31Q8NA23 367 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 CCDC54Q8NEL0 328 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 RPS4Y2Q8TD47 263 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 GHSRQ92847 366 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 TMIGD2Q96BF3 282 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 PGLYRP3Q96LB9 341 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 KCNS3Q9BQ31 491 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 MED18Q9BUE0 208 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 TMED9Q9BVK6 235 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 FUNDC2Q9BWH2 189 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 RGCCQ9H4X1 137 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 EXOSC4Q9NPD3 245 aaKnown RBP11.15□□□□□ -0.62
CLK3-214ENST00000564096 NGBQ9NPG2 151 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 BRD7Q9NPI1 651 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 CRNNQ9UBG3 495 aaPredicted RBP11.15□□□□□ -0.62
CLK3-214ENST00000564096 EIF3KQ9UBQ5 218 aaKnown RBP11.15□□□□□ -0.62
CLK3-214ENST00000564096 ENPP5Q9UJA9 477 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 SSR3Q9UNL2 185 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 ZNF281Q9Y2X9 895 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 ZGRF1Q86YA3 2104 aa11.15□□□□□ -0.62
CLK3-214ENST00000564096 POLEQ07864 2286 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms