RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 EXOSC4Q9NPD3 245 aaKnown RBP8.87□□□□□ -0.99
SMG1-208ENST00000563448 TXNL4BQ9NX01 149 aaKnown RBP8.87□□□□□ -0.99
SMG1-208ENST00000563448 OR52A1Q9UKL2 312 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 GTF2A1LQ9UNN4 478 aa8.87□□□□□ -0.99
SMG1-208ENST00000563448 HCFC1P51610 2035 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 A0A1W2PR80 420 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 TRIM64BA6NI03 449 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 A8MXE2 369 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 F5H5K5 113 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 LOC110117498-PIK3R3F6TDL0 507 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 SC5DO75845 299 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 UBL3O95164 117 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 ARR3P36575 388 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 ZNF121P58317 390 aaPredicted RBP8.86□□□□□ -0.99
SMG1-208ENST00000563448 PSMA6P60900 246 aaKnown RBP8.86□□□□□ -0.99
SMG1-208ENST00000563448 GALK2Q01415 458 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 SPCS2Q15005 226 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 P2RY6Q15077 328 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 TRAM1Q15629 374 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 ODF4Q2M2E3 257 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 ZNF829Q3KNS6 432 aaPredicted RBP8.86□□□□□ -0.99
SMG1-208ENST00000563448 TIMM50Q3ZCQ8 353 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 SFRP5Q5T4F7 317 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 TMEM53Q6P2H8 277 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 GDPGP1Q6ZNW5 385 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 ZNF283Q8N7M2 679 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 CPEB3Q8NE35 698 aaKnown RBP8.86□□□□□ -0.99
SMG1-208ENST00000563448 C1orf162Q8NEQ5 155 aaPredicted RBP8.86□□□□□ -0.99
SMG1-208ENST00000563448 OR5AK2Q8NH90 309 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 ABHD4Q8TB40 342 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 RND1Q92730 232 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 ZNF75AQ96N20 296 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 BRD7Q9NPI1 651 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 SSR3Q9UNL2 185 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 ZNF281Q9Y2X9 895 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 RP1L1Q8IWN7 2480 aaPredicted RBP8.86□□□□□ -0.99
SMG1-208ENST00000563448 SPTA1P02549 2419 aa8.86□□□□□ -0.99
SMG1-208ENST00000563448 ARPC4-TTLL3A0A0A6YYG9 625 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 TMEM212A6NML5 194 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 CCL21O00585 134 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 GPRIN2O60269 458 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 RGS9O75916 674 aaPredicted RBP8.85□□□□□ -0.99
SMG1-208ENST00000563448 HLA-DPB1P04440 258 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 SLC2A1P11166 492 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 MAGEB1P43366 347 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 HTR5AP47898 357 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 HGFACQ04756 655 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 ECH1Q13011 328 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 GSG1Q2KHT4 349 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 BHLHA15Q7RTS1 189 aaPredicted RBP8.85□□□□□ -0.99
SMG1-208ENST00000563448 PRSS45Q7RTY3 260 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 DPPA2Q7Z7J5 298 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 MRGPRGQ86SM5 289 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 MDP1Q86V88 176 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 ZNF584Q8IVC4 421 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 RDH10Q8IZV5 341 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 MS4A15Q8N5U1 240 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 WDR31Q8NA23 367 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 OR10AC1Q8NH08 325 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 NDNFQ8TB73 568 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 NANOS1Q8WY41 292 aaKnown RBP8.85□□□□□ -0.99
SMG1-208ENST00000563448 BBC3Q96PG8 261 aaPredicted RBP8.85□□□□□ -0.99
SMG1-208ENST00000563448 PBOV1Q9GZY1 135 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 SLC17A5Q9NRA2 495 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 GALNT8Q9NY28 637 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 JKAMPQ9P055 326 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 ZNF319Q9P2F9 582 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 A0A1W2PPW3 197 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 C5orf63A6NC05 138 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 M0R135 149 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 TTRP02766 147 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 HOXB1P14653 301 aaPredicted RBP8.85□□□□□ -0.99
SMG1-208ENST00000563448 GALP22466 123 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 APEX1P27695 318 aaKnown RBP8.85□□□□□ -0.99
SMG1-208ENST00000563448 FGF9P31371 208 aaPredicted RBP8.85□□□□□ -0.99
SMG1-208ENST00000563448 ACSM3Q53FZ2 586 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 YIF1BQ5BJH7 314 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 BCL2L15Q5TBC7 163 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 C22orf42Q6IC83 251 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 ZNF544Q6NX49 715 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 UNQ9370/PRO34162Q6UXP9 181 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 STAC2Q6ZMT1 411 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 ELMOD2Q8IZ81 293 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 ALDH16A1Q8IZ83 802 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 ZNF676Q8N7Q3 588 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 OR8B12Q8NGG6 310 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 SPTSSAQ969W0 71 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 ZNF799Q96GE5 643 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 COMMD4Q9H0A8 199 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 NUFIP1Q9UHK0 495 aaKnown RBP8.85□□□□□ -0.99
SMG1-208ENST00000563448 N6AMT1Q9Y5N5 214 aa8.85□□□□□ -0.99
SMG1-208ENST00000563448 LOC100509620A0A075B734 347 aa8.84□□□□□ -0.99
SMG1-208ENST00000563448 EEF1E1-BLOC1S5C9J1V9 151 aa8.84□□□□□ -0.99
SMG1-208ENST00000563448 H3BSH0 61 aa8.84□□□□□ -0.99
SMG1-208ENST00000563448 SLC22A1O15245 554 aa8.84□□□□□ -0.99
SMG1-208ENST00000563448 EEF1E1O43324 174 aaKnown RBP8.84□□□□□ -0.99
SMG1-208ENST00000563448 ANXA2P07355 339 aaKnown RBP8.84□□□□□ -0.99
SMG1-208ENST00000563448 ACSM4P0C7M7 580 aa8.84□□□□□ -0.99
SMG1-208ENST00000563448 COX5BP10606 129 aa8.84□□□□□ -0.99
SMG1-208ENST00000563448 PCSK6P29122 969 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms