RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 KRTCAP3Q53RY4 240 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 PHYHD1Q5SRE7 291 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 HIST2H3PS2Q5TEC6 136 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 CORO6Q6QEF8 472 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 FAM180AQ6UWF9 173 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 CFAP77Q6ZQR2 320 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 HIST2H3AQ71DI3 136 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 FGD2Q7Z6J4 655 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 ADGRE4PQ86SQ3 457 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 SIAH3Q8IW03 269 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 TUSC5Q8IXB3 177 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 ZNF100Q8IYN0 542 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 PRSS35Q8N3Z0 413 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 CCDC54Q8NEL0 328 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 SPTSSAQ969W0 71 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 DERL3Q96Q80 235 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 DCLRE1CQ96SD1 692 aaKnown RBP8.53□□□□□ -1.04
UBFD1-202ENST00000563366 KCNJ15Q99712 375 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 ZNF416Q9BWM5 594 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 BARHL1Q9BZE3 327 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 C7orf69Q9H7B7 122 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 GPR35Q9HC97 309 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 CLCF1Q9UBD9 225 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 UPB1Q9UBR1 384 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 NUFIP1Q9UHK0 495 aaKnown RBP8.53□□□□□ -1.04
UBFD1-202ENST00000563366 OR52A1Q9UKL2 312 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 PCDHB10Q9UN67 800 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 DHDHQ9UQ10 334 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 EMC9Q9Y3B6 208 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 CMAHPQ9Y471 501 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 ALPK2Q86TB3 2170 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 AKAP13Q12802 2813 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 NOTOA8MTQ0 251 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 LRRTM2O43300 516 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 SLC19A2O60779 497 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 SS18L1O75177 396 aaPredicted RBP8.52□□□□□ -1.05
UBFD1-202ENST00000563366 CNOT4O95628 575 aaKnown RBP8.52□□□□□ -1.05
UBFD1-202ENST00000563366 GABRA1P14867 456 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 SRMP19623 302 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 FSTP19883 344 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 AGTR1P30556 359 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 KIR3DL2P43630 455 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 GSK3AP49840 483 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 ENDOGQ14249 297 aaKnown RBP8.52□□□□□ -1.05
UBFD1-202ENST00000563366 SLC36A2Q495M3 483 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 ELFN2Q5R3F8 820 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 TSPO2Q5TGU0 170 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 SFXN4Q6P4A7 337 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 C16orf87Q6PH81 154 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 SPATC1Q76KD6 591 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 ZNF627Q7L945 461 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 LUZP2Q86TE4 346 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 CDH24Q86UP0 819 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 ELMOD2Q8IZ81 293 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 SLC22A24Q8N4F4 322 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 IL17RDQ8NFM7 739 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 SNRNP27Q8WVK2 155 aaKnown RBP8.52□□□□□ -1.05
UBFD1-202ENST00000563366 TMEM106AQ96A25 262 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 KCNS3Q9BQ31 491 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 SLC30A2Q9BRI3 323 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 CALHM2Q9HA72 323 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 NOX4Q9NPH5 578 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 FAM206AQ9NX38 181 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 PLEK2Q9NYT0 353 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 ABRACLQ9P1F3 81 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 MALT1Q9UDY8 824 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 PLEKHB1Q9UF11 243 aaPredicted RBP8.52□□□□□ -1.05
UBFD1-202ENST00000563366 ZNF391Q9UJN7 358 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 TUBD1Q9UJT1 453 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 TIMM10BQ9Y5J6 103 aa8.52□□□□□ -1.05
UBFD1-202ENST00000563366 TRBV5-7A0A0A0MS05 114 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 A0A1B0GVI7 797 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 ANXA2P2A6NMY6 339 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 VGLL3A8MV65 326 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 RER1O15258 196 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 SGCEO43556 437 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 WDR1O75083 606 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 PNPP00491 289 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 ANXA2P07355 339 aaKnown RBP8.51□□□□□ -1.05
UBFD1-202ENST00000563366 ADRB1P08588 477 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 HOXD4P09016 255 aaPredicted RBP8.51□□□□□ -1.05
UBFD1-202ENST00000563366 FAM87AP0C7U9 286 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 PTBP1P26599 531 aaKnown RBP eCLIP8.51□□□□□ -1.05
UBFD1-202ENST00000563366 OTX1P32242 354 aaPredicted RBP8.51□□□□□ -1.05
UBFD1-202ENST00000563366 TALDO1P37837 337 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 OR3A2P47893 321 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 ID4P47928 161 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 CAPZA1P52907 286 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 PPP5CP53041 499 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 TPTEP56180 551 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 SCAND1P57086 179 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 TGFBR3Q03167 851 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 MFGE8Q08431 387 aaPredicted RBP8.51□□□□□ -1.05
UBFD1-202ENST00000563366 INSL4Q14641 139 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 C3AR1Q16581 482 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 TBR1Q16650 682 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 METAP1DQ6UB28 335 aaPredicted RBP8.51□□□□□ -1.05
UBFD1-202ENST00000563366 DRAM2Q6UX65 266 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 ZNF813Q6ZN06 617 aa8.51□□□□□ -1.05
UBFD1-202ENST00000563366 FAM214BQ7L5A3 538 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms