RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ERI1Q8IV48 349 aaKnown RBP7.29□□□□□ -1.24
UBR1-204ENST00000563239 C10orf67Q8IYJ2 551 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 C1orf174Q8IYL3 243 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 PQLC1Q8N2U9 271 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 CBR4Q8N4T8 237 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 TCEANCQ8N8B7 351 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 TMEM163Q8TC26 289 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 C10orf105Q8TEF2 133 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 NEU4Q8WWR8 484 aaPredicted RBP7.29□□□□□ -1.24
UBR1-204ENST00000563239 CMBLQ96DG6 245 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 SLAMF6Q96DU3 332 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 C18orf12Q96KH6 178 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 INTS14Q96SY0 518 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 TEAD3Q99594 435 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 RBM4BQ9BQ04 359 aaKnown RBP7.29□□□□□ -1.24
UBR1-204ENST00000563239 C1QTNF5Q9BXJ0 243 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 REG4Q9BYZ8 158 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 RAB1BQ9H0U4 201 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 RIBC2Q9H4K1 309 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 GSX1Q9H4S2 264 aaPredicted RBP7.29□□□□□ -1.24
UBR1-204ENST00000563239 DYNLRB1Q9NP97 96 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 FBXO9Q9UK97 447 aaPredicted RBP7.29□□□□□ -1.24
UBR1-204ENST00000563239 ANK3Q12955 4377 aaKnown RBP7.29□□□□□ -1.24
UBR1-204ENST00000563239 C17orf100A8MU93 164 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 PRR32B1ATL7 298 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 F5H5K5 113 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 LYNX1G3V0Z9 82 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 J3QW42 95 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 LILRA1O75019 489 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 LYNX1P0DP58 116 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 DAOP14920 347 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 KITLGP21583 273 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 TUBG1P23258 451 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 COL8A2P25067 703 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 OPRL1P41146 370 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 MAGEB1P43366 347 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 RGS6P49758 472 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 ALDH3A2P51648 485 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 HCCSP53701 268 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 DSCR9P59020 149 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 EIF2B1Q14232 305 aaKnown RBP7.28□□□□□ -1.24
UBR1-204ENST00000563239 NKPD1Q17RQ9 610 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 KLHL12Q53G59 568 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 SPRNQ5BIV9 151 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 UNQ6126/PRO20091Q6UXV3 157 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 FBXW12Q6X9E4 464 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 Q6ZR03 302 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 SPATC1Q76KD6 591 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 PRSS45Q7RTY3 260 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 MAPK1IP1LQ8NDC0 245 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 OR6N2Q8NGY6 317 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 OTOSQ8NHW6 89 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 RNF133Q8WVZ7 376 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 YIPF5Q969M3 257 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 UBE2FQ969M7 185 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 APOBEC3DQ96AK3 386 aaPredicted RBP7.28□□□□□ -1.24
UBR1-204ENST00000563239 HAVCR1Q96D42 359 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 PLEKHA8Q96JA3 519 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 IL4I1Q96RQ9 567 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 MBOAT4Q96T53 435 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 ABHD6Q9BV23 337 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 MS4A5Q9H3V2 200 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 TUBG2Q9NRH3 451 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 SLCO1C1Q9NYB5 712 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 PTTG3PQ9NZH4 202 aa7.28□□□□□ -1.24
UBR1-204ENST00000563239 PURGQ9UJV8 347 aaKnown RBP7.28□□□□□ -1.24
UBR1-204ENST00000563239 NSD1Q96L73 2696 aaPredicted RBP7.28□□□□□ -1.24
UBR1-204ENST00000563239 A0A1B0GWJ7 208 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 M0R135 149 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 DLGAP1O14490 977 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 SMAD7O15105 426 aaKnown RBP7.27□□□□□ -1.25
UBR1-204ENST00000563239 IGHV1-46P01743 117 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 ADH4P08319 380 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 INHBBP09529 407 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 RAC2P15153 192 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 ALOX5APP20292 161 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 GIFP27352 417 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 GCH1P30793 250 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 NAA10P41227 235 aaPredicted RBP7.27□□□□□ -1.25
UBR1-204ENST00000563239 ZNF81P51508 661 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 PRKXP51817 358 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 SELENOVP59797 346 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 HNRNPA0Q13151 305 aaKnown RBP7.27□□□□□ -1.25
UBR1-204ENST00000563239 CDK5R2Q13319 367 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 RIN1Q13671 783 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 GGTLC2Q14390 218 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 SNAI3Q3KNW1 292 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 ZIK1Q3SY52 487 aaPredicted RBP7.27□□□□□ -1.25
UBR1-204ENST00000563239 NXNL2Q5VZ03 156 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 CLEC2AQ6UVW9 174 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 MEPCEQ7L2J0 689 aaKnown RBP7.27□□□□□ -1.25
UBR1-204ENST00000563239 SHFQ7M4L6 423 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 SLC16A9Q7RTY1 509 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 ZNF786Q8N393 782 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 UBASH3BQ8TF42 649 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 FAM168AQ92567 244 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 SPTSSAQ969W0 71 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 ZNF799Q96GE5 643 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 HRASLS5Q96KN8 279 aa7.27□□□□□ -1.25
UBR1-204ENST00000563239 KCNJ15Q99712 375 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms