RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 APEX1P27695 318 aaKnown RBP13.45□□□□□ -0.26
USB1-208ENST00000563207 GDI2P50395 445 aaKnown RBP13.45□□□□□ -0.26
USB1-208ENST00000563207 GALK2Q01415 458 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 IL18R1Q13478 541 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 OCLNQ16625 522 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 CHRFAM7AQ494W8 412 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 ELFN2Q5R3F8 820 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 ZNF774Q6NX45 483 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 VASH1Q7L8A9 365 aaPredicted RBP13.45□□□□□ -0.26
USB1-208ENST00000563207 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.45□□□□□ -0.26
USB1-208ENST00000563207 ERI1Q8IV48 349 aaKnown RBP13.45□□□□□ -0.26
USB1-208ENST00000563207 PHC2Q8IXK0 858 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 ZNF454Q8N9F8 522 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 BBS1Q8NFJ9 593 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 AKR7LQ8NHP1 331 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 ZMYND19Q96E35 227 aaPredicted RBP13.45□□□□□ -0.26
USB1-208ENST00000563207 POM121L2Q96KW2 1035 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 Q96MT0 163 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 DCLRE1CQ96SD1 692 aaKnown RBP13.45□□□□□ -0.26
USB1-208ENST00000563207 COQ7Q99807 217 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 PLK3Q9H4B4 646 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 WDR76Q9H967 626 aa13.45□□□□□ -0.26
USB1-208ENST00000563207 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.45□□□□□ -0.26
USB1-208ENST00000563207 LYNX1G3V0Z9 82 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 RER1O15258 196 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 ICMTO60725 284 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 LYNX1P0DP58 116 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 NR4A1P22736 598 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 HTR1FP30939 366 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 RAD52P43351 418 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 NR4A2P43354 598 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 HTR5AP47898 357 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 RPS23P62266 143 aaKnown RBP13.44□□□□□ -0.26
USB1-208ENST00000563207 SNRPD2P62316 118 aaKnown RBP13.44□□□□□ -0.26
USB1-208ENST00000563207 ADARB1P78563 741 aaKnown RBP13.44□□□□□ -0.26
USB1-208ENST00000563207 DBPQ10586 325 aaPredicted RBP13.44□□□□□ -0.26
USB1-208ENST00000563207 POU4F2Q12837 409 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 CCDC92Q53HC0 331 aaPredicted RBP13.44□□□□□ -0.26
USB1-208ENST00000563207 KRT80Q6KB66 452 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 SLC16A9Q7RTY1 509 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 SETD9Q8NE22 299 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 OR1F12Q8NHA8 337 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 RHOXF1Q8NHV9 184 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 MNTQ99583 582 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 DOK1Q99704 481 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 YIPF3Q9GZM5 350 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 ELOVL3Q9HB03 270 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 EIF3KQ9UBQ5 218 aaKnown RBP13.44□□□□□ -0.26
USB1-208ENST00000563207 TMEM14AQ9Y6G1 99 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 HSPE1-MOB4S4R3N1 261 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 FBN3Q75N90 2809 aa13.44□□□□□ -0.26
USB1-208ENST00000563207 C5orf49A4QMS7 147 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 LRP5LA4QPB2 252 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 CCDC182A6NF36 153 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 RNF212BA8MTL3 300 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 SPARCP09486 303 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 BMP4P12644 408 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 TUBG1P23258 451 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 GLRXP35754 106 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 PDLIM4P50479 330 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 EFNB3Q15768 340 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 CYB5R2Q6BCY4 276 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 CORO6Q6QEF8 472 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 LYPD4Q6UWN0 246 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 DPY19L4Q7Z388 723 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 DCXRQ7Z4W1 244 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 LINC00346Q8IVM7 164 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 ENTHD1Q8IYW4 607 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 OR6N2Q8NGY6 317 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 OTOSQ8NHW6 89 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 SPATA3Q8NHX4 192 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 NRG4Q8WWG1 115 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 CYGBQ8WWM9 190 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 MSI2Q96DH6 328 aaKnown RBP13.43□□□□□ -0.26
USB1-208ENST00000563207 ZNF582Q96NG8 517 aaPredicted RBP13.43□□□□□ -0.26
USB1-208ENST00000563207 ATF6BQ99941 703 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 ADI1Q9BV57 179 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 BCL2L14Q9BZR8 327 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 ZNF442Q9H7R0 627 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 CHODLQ9H9P2 273 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 TUBG2Q9NRH3 451 aa13.43□□□□□ -0.26
USB1-208ENST00000563207 DDX28Q9NUL7 540 aaKnown RBP13.43□□□□□ -0.26
USB1-208ENST00000563207 LOC100509620A0A075B734 347 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 B9A039 149 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 J3QW42 95 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 M0R129 80 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 GABRB1P18505 474 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 IL2RGP31785 369 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 CAPGP40121 348 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 SLC15A1P46059 708 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 RGS6P49758 472 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 UCP2P55851 309 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 ZNF691Q5VV52 312 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 OTPQ5XKR4 325 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 CFAP77Q6ZQR2 320 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 ST7LQ8TDW4 575 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 UBE2FQ969M7 185 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 MAP6Q96JE9 813 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 COG8Q96MW5 612 aa13.42□□□□□ -0.26
USB1-208ENST00000563207 CNN2Q99439 309 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms