RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 OR10K1Q8NGX5 313 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 NKX3-1Q99801 234 aaPredicted RBP11.67□□□□□ -0.54
USB1-207ENST00000563149 VRK1Q99986 396 aaPredicted RBP11.67□□□□□ -0.54
USB1-207ENST00000563149 GAL3ST1Q99999 423 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 TMEM185BQ9H7F4 350 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 MOB1AQ9H8S9 216 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 CENPMQ9NSP4 180 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 KLHL13Q9P2N7 655 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 ZNF230Q9UIE0 474 aaPredicted RBP11.67□□□□□ -0.54
USB1-207ENST00000563149 FBXO4Q9UKT5 387 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 B3GALT5Q9Y2C3 310 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 LAMA3Q16787 3333 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 TRANK1O15050 2925 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 A0A1W2PNV4 684 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 ETV2O00321 342 aaPredicted RBP11.67□□□□□ -0.54
USB1-207ENST00000563149 SYT7O43581 403 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 DUX1O43812 170 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 STK17BO94768 372 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 TTRP02766 147 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 RAB3AP20336 220 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 TAS2R31P59538 309 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 IL13RA1P78552 427 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 TLE3Q04726 772 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 FAM189A2Q15884 450 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 PRAMEF17Q5VTA0 474 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 C3orf33Q6P1S2 294 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 ZNF529Q6P280 563 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 RHOUQ7L0Q8 258 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 OR2W3Q7Z3T1 314 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 LINC00346Q8IVM7 164 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 CADM4Q8NFZ8 388 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 THAP6Q8TBB0 222 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 RLN3Q8WXF3 142 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 SLAMF6Q96DU3 332 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 TGIF2Q9GZN2 237 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 ZMAT3Q9HA38 289 aaKnown RBP11.67□□□□□ -0.54
USB1-207ENST00000563149 IFT46Q9NQC8 304 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 ZC4H2Q9NQZ6 224 aa11.67□□□□□ -0.54
USB1-207ENST00000563149 SPTBP11277 2137 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 RNF222A6NCQ9 220 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 WIPF3A6NGB9 483 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 TMEM14DPA8MWL7 114 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 DUS4LO95620 317 aaKnown RBP11.66□□□□□ -0.54
USB1-207ENST00000563149 IL11P20809 199 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 MSX1P28360 303 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 DLSTP36957 453 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 CSNK1EP49674 416 aaKnown RBP11.66□□□□□ -0.54
USB1-207ENST00000563149 OR1D5P58170 312 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 POU3F1Q03052 451 aaPredicted RBP11.66□□□□□ -0.54
USB1-207ENST00000563149 FMODQ06828 376 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 PPP1R1AQ13522 171 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 UQCC3Q6UW78 93 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 CD163Q86VB7 1156 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 KDM8Q8N371 416 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 RELL2Q8NC24 303 aaPredicted RBP11.66□□□□□ -0.54
USB1-207ENST00000563149 CHST4Q8NCG5 386 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 OR4S1Q8NGB4 309 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 PPP1R1CQ8WVI7 109 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 C11orf40Q8WZ69 217 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 PBOV1Q9GZY1 135 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 CST11Q9H112 138 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 BARX1Q9HBU1 254 aaPredicted RBP11.66□□□□□ -0.54
USB1-207ENST00000563149 ALKBH4Q9NXW9 302 aa11.66□□□□□ -0.54
USB1-207ENST00000563149 VSTM2BA6NLU5 285 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 TOR1AO14656 332 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 EFSO43281 561 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 LMX1BO60663 402 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 IFNA6P05013 189 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 VSIG8P0DPA2 414 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 FOLR1P15328 257 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 CNR1P21554 472 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 LAP3P28838 519 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 GNALP38405 381 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 PRKXP51817 358 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 NXPH1P58417 271 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 CYCSP99999 105 aaKnown RBP11.65□□□□□ -0.54
USB1-207ENST00000563149 UNC119Q13432 240 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 NKPD1Q17RQ9 610 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 ACTBL2Q562R1 376 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 PAN3Q58A45 887 aaKnown RBP11.65□□□□□ -0.54
USB1-207ENST00000563149 SLC25A53Q5H9E4 307 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 THEM4Q5T1C6 240 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 INO80EQ8NBZ0 244 aaPredicted RBP11.65□□□□□ -0.54
USB1-207ENST00000563149 ADPRHL1Q8NDY3 354 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 OR52N4Q8NGI2 321 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 OR10R2Q8NGX6 335 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 NUBPLQ8TB37 319 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 ELP5Q8TE02 316 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 RNF138Q8WVD3 245 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 NKD1Q969G9 470 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 ARL5BQ96KC2 179 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 C5orf34Q96MH7 638 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 CDC6Q99741 560 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 TPSD1Q9BZJ3 242 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 PIGMQ9H3S5 423 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 GAREM1Q9H706 876 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 MYEF2Q9P2K5 600 aaKnown RBP11.65□□□□□ -0.54
USB1-207ENST00000563149 SUSD2Q9UGT4 822 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 ANAPC10Q9UM13 185 aa11.65□□□□□ -0.54
USB1-207ENST00000563149 RPH3AQ9Y2J0 694 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms