RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 OR2T29Q8NH02 315 aa14.25□□□□□ -0.13
CLK3-210ENST00000563112 ITLN1Q8WWA0 313 aa14.25□□□□□ -0.13
CLK3-210ENST00000563112 ZNF582Q96NG8 517 aaPredicted RBP14.25□□□□□ -0.13
CLK3-210ENST00000563112 ATF6BQ99941 703 aa14.25□□□□□ -0.13
CLK3-210ENST00000563112 TSSK6Q9BXA6 273 aa14.25□□□□□ -0.13
CLK3-210ENST00000563112 HCAR1Q9BXC0 346 aa14.25□□□□□ -0.13
CLK3-210ENST00000563112 METTL17Q9H7H0 456 aaPredicted RBP14.25□□□□□ -0.13
CLK3-210ENST00000563112 CYB5R1Q9UHQ9 305 aa14.25□□□□□ -0.13
CLK3-210ENST00000563112 PCDHB10Q9UN67 800 aa14.25□□□□□ -0.13
CLK3-210ENST00000563112 BAIAP2Q9UQB8 552 aa14.25□□□□□ -0.13
CLK3-210ENST00000563112 PPP1R3CQ9UQK1 317 aa14.25□□□□□ -0.13
CLK3-210ENST00000563112 SAMHD1Q9Y3Z3 626 aaKnown RBP14.25□□□□□ -0.13
CLK3-210ENST00000563112 TANC2Q9HCD6 1990 aa14.25□□□□□ -0.13
CLK3-210ENST00000563112 A0A0G2JMP0 313 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 A0A0X1KG70 313 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 F5H5K5 113 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 IFNL4K9M1U5 179 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 BHLHE40O14503 412 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 SBK2P0C263 348 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 TPTEP56180 551 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 MS4A2Q01362 244 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 PPP1R8Q12972 351 aaKnown RBP14.24□□□□□ -0.13
CLK3-210ENST00000563112 MALLQ13021 153 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 MICAQ29983 383 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 CFAP77Q6ZQR2 320 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 SPICQ8N5J4 248 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 CYB561A3Q8NBI2 242 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 OR4M2Q8NGB6 313 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 SPTSSAQ969W0 71 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 ASB9Q96DX5 294 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 REPIN1Q9BWE0 567 aaKnown RBP14.24□□□□□ -0.13
CLK3-210ENST00000563112 C1QTNF5Q9BXJ0 243 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 PLA2G12AQ9BZM1 189 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 C1orf21Q9H246 121 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 OCEL1Q9H607 264 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 U3KQV3 271 aa14.24□□□□□ -0.13
CLK3-210ENST00000563112 J3QLI3 93 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 LCATP04180 440 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 ACSM4P0C7M7 580 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 T-ENOLP0DO92 83 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 RAP2AP10114 183 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 GATA3P23771 443 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 PYCR1P32322 319 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 GGT2P36268 569 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 SRP9P49458 86 aaKnown RBP14.23□□□□□ -0.13
CLK3-210ENST00000563112 ERFP50548 548 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 DBPQ10586 325 aaPredicted RBP14.23□□□□□ -0.13
CLK3-210ENST00000563112 TRAP1Q12931 704 aaKnown RBP14.23□□□□□ -0.13
CLK3-210ENST00000563112 GK3PQ14409 553 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 DCAF12L2Q5VW00 463 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 COLCA1Q6ZS62 124 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 ZNF771Q7L3S4 317 aaPredicted RBP14.23□□□□□ -0.13
CLK3-210ENST00000563112 LNX2Q8N448 690 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 KLHL36Q8N4N3 616 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 ZNF283Q8N7M2 679 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 OR2T33Q8NG76 320 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 CCDC124Q96CT7 223 aaKnown RBP14.23□□□□□ -0.13
CLK3-210ENST00000563112 OR2V2Q96R30 315 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 DGCR6LQ9BY27 220 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 G6PC2Q9NQR9 355 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 MRPL22Q9NWU5 206 aaKnown RBP14.23□□□□□ -0.13
CLK3-210ENST00000563112 TAS2R1Q9NYW7 299 aa14.23□□□□□ -0.13
CLK3-210ENST00000563112 TVP23AA6NH52 213 aa14.22□□□□□ -0.13
CLK3-210ENST00000563112 IQCF6A8MYZ5 107 aa14.22□□□□□ -0.13
CLK3-210ENST00000563112 IFNGP01579 166 aa14.22□□□□□ -0.13
CLK3-210ENST00000563112 IGHV2-70P01814 119 aa14.22□□□□□ -0.13
CLK3-210ENST00000563112 FMO3P31513 532 aa14.22□□□□□ -0.13
CLK3-210ENST00000563112 SRSF2Q01130 221 aaKnown RBP14.22□□□□□ -0.13
CLK3-210ENST00000563112 RSPO1Q2MKA7 263 aaPredicted RBP14.22□□□□□ -0.13
CLK3-210ENST00000563112 KRTAP27-1Q3LI81 207 aa14.22□□□□□ -0.13
CLK3-210ENST00000563112 TMEM155Q4W5P6 130 aa14.22□□□□□ -0.13
CLK3-210ENST00000563112 SLC37A3Q8NCC5 494 aa14.22□□□□□ -0.13
CLK3-210ENST00000563112 OR8D4Q8NGM9 314 aa14.22□□□□□ -0.13
CLK3-210ENST00000563112 DDOQ99489 341 aa14.22□□□□□ -0.13
CLK3-210ENST00000563112 THTPAQ9BU02 230 aa14.22□□□□□ -0.13
CLK3-210ENST00000563112 C19orf24Q9BVV8 132 aa14.22□□□□□ -0.13
CLK3-210ENST00000563112 TMEM100Q9NV29 134 aa14.22□□□□□ -0.13
CLK3-210ENST00000563112 DCAF16Q9NXF7 216 aa14.22□□□□□ -0.13
CLK3-210ENST00000563112 A0A0A6YYJ9 748 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 FOXH1O75593 365 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 CST1P01037 141 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 HOXB6P17509 224 aaKnown RBP14.21□□□□□ -0.13
CLK3-210ENST00000563112 SLC6A9P48067 706 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 BLVRAP53004 296 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 BTG1P62324 171 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 TAF13Q15543 124 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 LRRC28Q86X40 367 aaPredicted RBP14.21□□□□□ -0.13
CLK3-210ENST00000563112 BHLHE23Q8NDY6 225 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 OR10G2Q8NGC3 310 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 OR10AD1Q8NGE0 317 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 OR51L1Q8NGJ5 315 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 OR9Q1Q8NGQ5 310 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 GIPC3Q8TF64 312 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 MAP6Q96JE9 813 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 MEGF10Q96KG7 1140 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 SLC30A2Q9BRI3 323 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 WDR76Q9H967 626 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 VNN3Q9NY84 501 aa14.21□□□□□ -0.13
CLK3-210ENST00000563112 FBN3Q75N90 2809 aa14.21□□□□□ -0.14
CLK3-210ENST00000563112 LRRC30A6NM36 301 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms