RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ZNF391Q9UJN7 358 aa6.8□□□□□ -1.32
TCF4-216ENST00000562680 TRAV18A0A075B6X5 111 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 SPAARA0A1B0GVQ0 90 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 LNP1A1A4G5 178 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 SSX4O60224 188 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 MPIG6BO95866 241 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 RNF224P0DH78 156 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 PTAFRP25105 342 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 LIPAP38571 399 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 C9orf152Q5JTZ5 239 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 FHL5Q5TD97 284 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 SERPINA12Q8IW75 414 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 CSNK2A3Q8NEV1 391 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 APOBEC4Q8WW27 367 aaKnown RBP6.79□□□□□ -1.32
TCF4-216ENST00000562680 SMIM19Q96E16 107 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 ZMIZ1Q9ULJ6 1067 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 PROCRQ9UNN8 238 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 XRCC2O43543 280 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 TSPAN2O60636 221 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 BTF3P20290 206 aaKnown RBP6.79□□□□□ -1.32
TCF4-216ENST00000562680 CSRP1P21291 193 aaKnown RBP6.79□□□□□ -1.32
TCF4-216ENST00000562680 ETV6P41212 452 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 MEOX1P50221 254 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 CLN3Q13286 438 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 CDK5R1Q15078 307 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 SCGB2B2Q4G0G5 96 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 ELP2Q6IA86 826 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 ARMC10Q8N2F6 343 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 DEFB127Q9H1M4 99 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 SLCO5A1Q9H2Y9 848 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 ABCA7Q8IZY2 2146 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 A0A1W2PS29 197 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 PRAF2O60831 178 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 RBMXL2O75526 392 aaKnown RBP6.79□□□□□ -1.32
TCF4-216ENST00000562680 TGM4P49221 684 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 SLC17A1Q14916 467 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 ACTBL2Q562R1 376 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 UBE2NLQ5JXB2 153 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 CLEC9AQ6UXN8 241 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 OR56B1Q8NGI3 324 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 PTP4A1Q93096 173 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 PLA2G12AQ9BZM1 189 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 KLHL13Q9P2N7 655 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 SMCO3A2RU48 225 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 OR6C6A6NF89 314 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 RPS4Y1P22090 263 aaKnown RBP6.79□□□□□ -1.32
TCF4-216ENST00000562680 AQP6Q13520 282 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 CD226Q15762 336 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 SFXN4Q6P4A7 337 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 CBLN3Q6UW01 205 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 POC1BQ8TC44 478 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 DPF1Q92782 380 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 MARC2Q969Z3 335 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 FAM122AQ96E09 287 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 MEGF10Q96KG7 1140 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 EMC6Q9BV81 110 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 CACNG6Q9BXT2 260 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 RGCCQ9H4X1 137 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 CLEC2DQ9UHP7 191 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 R4GMQ9 66 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 PRKNO60260 465 aaPredicted RBP6.79□□□□□ -1.32
TCF4-216ENST00000562680 RBMXP38159 391 aaKnown RBP6.79□□□□□ -1.32
TCF4-216ENST00000562680 ZNF136P52737 540 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 TLE4Q04727 773 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 SNTB1Q13884 538 aaKnown RBP6.79□□□□□ -1.32
TCF4-216ENST00000562680 Q5PR19 223 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 PLCXD3Q63HM9 321 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 ANKRD34AQ69YU3 496 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 GDPD3Q7L5L3 318 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 NAA40Q86UY6 237 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 LINC00346Q8IVM7 164 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 KDM8Q8N371 416 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 SLC25A18Q9H1K4 315 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 B3GAT1Q9P2W7 334 aa6.79□□□□□ -1.32
TCF4-216ENST00000562680 TDRD6O60522 2096 aaKnown RBP6.78□□□□□ -1.32
TCF4-216ENST00000562680 NUP210Q8TEM1 1887 aaPredicted RBP6.78□□□□□ -1.32
TCF4-216ENST00000562680 IGLV3-12A0A075B6K2 115 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 TEX13DA0A0J9YY54 714 aaPredicted RBP6.78□□□□□ -1.32
TCF4-216ENST00000562680 LINC00587B1AMM8 73 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 CNOT4O95628 575 aaKnown RBP6.78□□□□□ -1.32
TCF4-216ENST00000562680 C1QBP02746 253 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 CHRM2P08172 466 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 CALCBP10092 127 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 HTR2CP28335 458 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 EPHA2P29317 976 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 MECP2P51608 486 aaKnown RBP6.78□□□□□ -1.32
TCF4-216ENST00000562680 LTBQ06643 244 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 B3GLCTQ6Y288 498 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 BCDIN3DQ7Z5W3 292 aaKnown RBP6.78□□□□□ -1.32
TCF4-216ENST00000562680 OR5M1Q8NGP8 315 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 RAB3CQ96E17 227 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 OR8B4Q96RC9 309 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 LMF1Q96S06 567 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 WNT5BQ9H1J7 359 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 NOX4Q9NPH5 578 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 FLRT3Q9NZU0 649 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 EXOGQ9Y2C4 368 aaKnown RBP6.78□□□□□ -1.32
TCF4-216ENST00000562680 PLXNA4Q9HCM2 1894 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 PQLC2LA1A4F0 135 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 PRR19A6NJB7 356 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms