RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 ARHGAP11BQ3KRB8 267 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 LINC01620Q4KN68 170 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 EMC4Q5J8M3 183 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 CLLU1Q5K131 121 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 LY6G6FQ5SQ64 297 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 FAM182AQ5T1J6 154 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 OTUD3Q5T2D3 398 aaPredicted RBP4.89□□□□□ -1.63
CAPN3-211ENST00000562199 AGAP6Q5VW22 663 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 LIPKQ5VXJ0 399 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 METRNLQ641Q3 311 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 FAM71E1Q6IPT2 247 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 LCN8Q6JVE9 175 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 BTNL8Q6UX41 500 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 CD300LDQ6UXZ3 194 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 CEACAM20Q6UY09 585 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 RPTNQ6XPR3 784 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 ZNF367Q7RTV3 350 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 TBC1D26Q86UD7 250 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 PARGQ86W56 976 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 ZC3HC1Q86WB0 502 aaKnown RBP4.89□□□□□ -1.63
CAPN3-211ENST00000562199 APOBEC3FQ8IUX4 373 aaKnown RBP4.89□□□□□ -1.63
CAPN3-211ENST00000562199 BAP18Q8IXM2 172 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 KLHDC8BQ8IXV7 354 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 ZNF567Q8N184 647 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 RNF149Q8NC42 400 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 OR4A4PQ8NGN8 299 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 OR1P1Q8NH06 330 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 OR2AE1Q8NHA4 323 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 CLEC4CQ8WTT0 213 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 FAM3CQ92520 227 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 GGHQ92820 318 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 ROPN1LQ96C74 230 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 FLYWCH2Q96CP2 140 aaKnown RBP4.89□□□□□ -1.63
CAPN3-211ENST00000562199 MS4A10Q96PG2 267 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 OR2M2Q96R28 347 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 URM1Q9BTM9 101 aaKnown RBP4.89□□□□□ -1.63
CAPN3-211ENST00000562199 NUDT9Q9BW91 350 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 CDCA4Q9BXL8 241 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 CXorf21Q9HAI6 301 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 GKN1Q9NS71 199 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 ASB6Q9NWX5 421 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 CD84Q9UIB8 345 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 PSORS1C1Q9UIG5 152 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 JPT1Q9UK76 154 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 USP22Q9UPT9 525 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 ZFP30Q9Y2G7 519 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 MGAMO43451 1857 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 DICER1Q9UPY3 1922 aaKnown RBP4.89□□□□□ -1.63
CAPN3-211ENST00000562199 COL4A5P29400 1685 aa4.89□□□□□ -1.63
CAPN3-211ENST00000562199 ZNF236Q9UL36 1845 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 TP53BP1Q12888 1972 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-211ENST00000562199 TBC1D3DA0A087WVF3 549 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 TBC1D3IA0A087WXS9 549 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 DHRS12A0PJE2 317 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 FAM90A27PA6NNH2 459 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 TBC1D3LB9A6J9 549 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 F6UZH7 168 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 SLC16A5O15375 505 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 CHST1O43916 411 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 DUSP11O75319 330 aaKnown RBP4.88□□□□□ -1.63
CAPN3-211ENST00000562199 VENTXO95231 258 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 NFATC1O95644 943 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 C6orf47O95873 294 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 HLA-AP01891 365 aaKnown RBP4.88□□□□□ -1.63
CAPN3-211ENST00000562199 ALDOBP05062 364 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 TBC1D3HP0C7X1 549 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 CD37P11049 281 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 IL7P13232 177 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 HIST1H1CP16403 213 aaKnown RBP4.88□□□□□ -1.63
CAPN3-211ENST00000562199 DUSP1P28562 367 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 HTR1FP30939 366 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 BCL6P41182 706 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 CDH12P55289 794 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 RAB5BP61020 215 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 RHOAP61586 193 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 STXBP1P61764 594 aaKnown RBP4.88□□□□□ -1.63
CAPN3-211ENST00000562199 TBPL1P62380 186 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 GNG3P63215 75 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 PRR5P85299 388 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 NFATC2Q13469 925 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 TMEM132DQ14C87 1099 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 ZIC1Q15915 447 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 GUCA2BQ16661 112 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 PARP15Q460N3 678 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 SPIN4Q56A73 249 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 TECRLQ5HYJ1 363 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 NCMAPQ5T1S8 102 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 GPRC6AQ5T6X5 926 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 AGBL4Q5VU57 503 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 TBC1D3CQ6IPX1 549 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 CES5AQ6NT32 575 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 TAPT1Q6NXT6 567 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 ZNF773Q6PK81 442 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 ZNF782Q6ZMW2 699 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-211ENST00000562199 SEM1Q6ZVN7 128 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 SSX6Q7RTT6 188 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 PTAR1Q7Z6K3 402 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-211ENST00000562199 NOXA1Q86UR1 476 aa4.88□□□□□ -1.63
CAPN3-211ENST00000562199 TMEM173Q86WV6 379 aaPredicted RBP4.88□□□□□ -1.63
CAPN3-211ENST00000562199 MEX3DQ86XN8 651 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms