RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 HSD11B2P80365 405 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 CEBPEQ15744 281 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 HEPN1Q6WQI6 88 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 PRSS41Q7RTY9 318 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 BIVMQ86UB2 503 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 OR4N5Q8IXE1 308 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 TMEFF1Q8IYR6 380 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 GABRG1Q8N1C3 465 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 BPIFB2Q8N4F0 458 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 OR52L1Q8NGH7 329 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 ZNF775Q96BV0 537 aaPredicted RBP11.95□□□□□ -0.5
CLK3-206ENST00000562078 SLC41A3Q96GZ6 507 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 SPACA7Q96KW9 195 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 ZFYVE21Q9BQ24 234 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 TWSG1Q9GZX9 223 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 KCNK15Q9H427 330 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 SPACA1Q9HBV2 294 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 CRLF2Q9HC73 371 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 SLC13A4Q9UKG4 626 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 PILRAQ9UKJ1 303 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 SLC7A7Q9UM01 511 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 KCNIP3Q9Y2W7 256 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 SLCO1B1Q9Y6L6 691 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 UNC119BA6NIH7 251 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 SEC14L6B5MCN3 397 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 C10orf142B7Z368 130 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 CYTIPO60759 359 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 TXNDC12O95881 172 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 SLC2A1P11166 492 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 SLC2A5P22732 501 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 CEACAM6P40199 344 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 GNG10P50151 68 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 RUNX2Q13950 521 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 DUSP5Q16690 384 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 SCGB2B2Q4G0G5 96 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 BTNL8Q6UX41 500 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 STAC2Q6ZMT1 411 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 SHISA5Q8N114 240 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 LRRC25Q8N386 305 aaPredicted RBP11.94□□□□□ -0.5
CLK3-206ENST00000562078 OR7G2Q8NG99 324 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 ASB17Q8WXJ9 295 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 SAT2Q96F10 170 aaPredicted RBP11.94□□□□□ -0.5
CLK3-206ENST00000562078 SERINC2Q96SA4 455 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 CMC2Q9NRP2 79 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 C20orf141Q9NUB4 165 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 MMP24Q9Y5R2 645 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 WIF1Q9Y5W5 379 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 C13orf42A0A1B0GVH6 325 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 H0YGG7 62 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 MKRN2OSH3BPM6 223 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 PHOX2AO14813 284 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 B3GALT2O43825 422 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 RAB3DO95716 219 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 AMY2AP04746 511 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 CSN2P05814 226 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 MAKP20794 623 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 ARF3P61204 181 aaPredicted RBP11.94□□□□□ -0.5
CLK3-206ENST00000562078 ID2Q02363 134 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 C1orf61Q13536 156 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 RPL22L1Q6P5R6 122 aaKnown RBP11.94□□□□□ -0.5
CLK3-206ENST00000562078 KCTD9Q7L273 389 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 C5orf24Q7Z6I8 188 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 FAM219AQ8IW50 185 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 HIST3H2BBQ8N257 126 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 PFN4Q8NHR9 129 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 RERGQ96A58 199 aaPredicted RBP11.94□□□□□ -0.5
CLK3-206ENST00000562078 KLHDC7BQ96G42 594 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 ZNF426Q9BUY5 554 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 HRASLS2Q9NWW9 162 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 DAPP1Q9UN19 280 aa11.94□□□□□ -0.5
CLK3-206ENST00000562078 FAM86C2PA6NEL3 165 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 SMIM10L1P0DMW3 83 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 BMP7P18075 431 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 RAB4AP20338 218 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 PSMB6P28072 239 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 SOX2P48431 317 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 RAC1P63000 192 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 ACTC1P68032 377 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 ACTA1P68133 377 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 GABREP78334 506 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 FZD2Q14332 565 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 PNLIPRP3Q17RR3 467 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 ZNF836Q6ZNA1 936 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 HIST2H3AQ71DI3 136 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 SLC35F3Q8IY50 421 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 PNLDC1Q8NA58 520 aaKnown RBP11.93□□□□□ -0.5
CLK3-206ENST00000562078 ACBD4Q8NC06 268 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 OR10AD1Q8NGE0 317 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 CASTOR1Q8WTX7 329 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 SMIM10Q96HG1 83 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 MCHR1Q99705 422 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 ARHGDIGQ99819 225 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 RNF126Q9BV68 326 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 SIDT1Q9NXL6 827 aaKnown RBP11.93□□□□□ -0.5
CLK3-206ENST00000562078 KCNE5Q9UJ90 142 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 KCNG2Q9UJ96 466 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 FARSAQ9Y285 508 aaKnown RBP11.93□□□□□ -0.5
CLK3-206ENST00000562078 PCDH15Q96QU1 1955 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 SPAG17Q6Q759 2223 aa11.93□□□□□ -0.5
CLK3-206ENST00000562078 SPTY2D1-AS1A0A0U1RR47 76 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms