RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 FCMRO60667 390 aa16.76■□□□□ 0.27
RAB40C-206ENST00000561781 ZIC2O95409 532 aaPredicted RBP16.76■□□□□ 0.27
RAB40C-206ENST00000561781 IL18BPO95998 194 aa16.76■□□□□ 0.27
RAB40C-206ENST00000561781 CYB5AP00167 134 aa16.76■□□□□ 0.27
RAB40C-206ENST00000561781 LIPCP11150 499 aa16.76■□□□□ 0.27
RAB40C-206ENST00000561781 CHATP28329 748 aa16.76■□□□□ 0.27
RAB40C-206ENST00000561781 DMRTA1Q5VZB9 504 aa16.76■□□□□ 0.27
RAB40C-206ENST00000561781 Q6ZVL8 140 aa16.76■□□□□ 0.27
RAB40C-206ENST00000561781 FAM129CQ86XR2 697 aa16.76■□□□□ 0.27
RAB40C-206ENST00000561781 OR51L1Q8NGJ5 315 aa16.76■□□□□ 0.27
RAB40C-206ENST00000561781 OR9A1PQ8NGU1 263 aa16.76■□□□□ 0.27
RAB40C-206ENST00000561781 DTD2Q96FN9 168 aa16.76■□□□□ 0.27
RAB40C-206ENST00000561781 CNN2Q99439 309 aaKnown RBP16.76■□□□□ 0.27
RAB40C-206ENST00000561781 LGR4Q9BXB1 951 aa16.76■□□□□ 0.27
RAB40C-206ENST00000561781 CST11Q9H112 138 aa16.76■□□□□ 0.27
RAB40C-206ENST00000561781 ZDHHC6Q9H6R6 413 aa16.76■□□□□ 0.27
RAB40C-206ENST00000561781 FARSAQ9Y285 508 aaKnown RBP16.76■□□□□ 0.27
RAB40C-206ENST00000561781 FBXO7Q9Y3I1 522 aa16.76■□□□□ 0.27
RAB40C-206ENST00000561781 PCYT1BQ9Y5K3 369 aaPredicted RBP16.76■□□□□ 0.27
RAB40C-206ENST00000561781 COL4A3Q01955 1670 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 A0A087WV48 116 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 ZNF736B4DX44 427 aaPredicted RBP16.75■□□□□ 0.27
RAB40C-206ENST00000561781 DUS4LO95620 317 aaKnown RBP16.75■□□□□ 0.27
RAB40C-206ENST00000561781 GCGP01275 180 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 TMEM11P17152 192 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 CSRP1P21291 193 aaKnown RBP16.75■□□□□ 0.27
RAB40C-206ENST00000561781 SKP1P63208 163 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.75■□□□□ 0.27
RAB40C-206ENST00000561781 RABEPKQ7Z6M1 372 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 MRPL52Q86TS9 123 aaKnown RBP16.75■□□□□ 0.27
RAB40C-206ENST00000561781 FJX1Q86VR8 437 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 ZDHHC22Q8N966 263 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 NEK7Q8TDX7 302 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 Q8WTZ3 238 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 OVCA2Q8WZ82 227 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 PRRT1Q99946 306 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 KLF16Q9BXK1 252 aaPredicted RBP16.75■□□□□ 0.27
RAB40C-206ENST00000561781 OR51B6Q9H340 312 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 TRAV27A0A087WT01 109 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 A0A087WWC5 75 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 ITGB1BP1O14713 200 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 CDC40O60508 579 aaKnown RBP eCLIP16.75■□□□□ 0.27
RAB40C-206ENST00000561781 DFFBO76075 338 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 CST4P01036 141 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 TRGC2P03986 189 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 TRGC1P0CF51 173 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 PRLHRP49683 370 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 Q499Y3 187 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 MIDNQ504T8 468 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 RPL7L1Q6DKI1 246 aaKnown RBP16.75■□□□□ 0.27
RAB40C-206ENST00000561781 OR2L13Q8N349 312 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 OR14K1Q8NGZ2 314 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 MRGPRX3Q96LB0 322 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 IL17FQ96PD4 163 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 PHF7Q9BWX1 381 aaPredicted RBP16.75■□□□□ 0.27
RAB40C-206ENST00000561781 GAL3ST2Q9H3Q3 398 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 DMDP11532 3685 aa16.75■□□□□ 0.27
RAB40C-206ENST00000561781 NCOR1O75376 2440 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 SYNDIG1LA6NDD5 238 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 LEFTY2O00292 366 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 TGOLN2O43493 480 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 ERAL1O75616 437 aaKnown RBP16.74■□□□□ 0.27
RAB40C-206ENST00000561781 CXCL1P09341 107 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 EPHA1P21709 976 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 CLDN2P57739 230 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 INSM1Q01101 510 aaPredicted RBP16.74■□□□□ 0.27
RAB40C-206ENST00000561781 PRAMEF14Q5SWL7 426 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 SLC35F2Q8IXU6 374 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 OR9K2Q8NGE7 335 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 CASTOR1Q8WTX7 329 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 SEH1LQ96EE3 360 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 MRGPRX4Q96LA9 322 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 PBDC1Q9BVG4 233 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 SLC17A5Q9NRA2 495 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 SLC2A8Q9NY64 477 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 PITPNC1Q9UKF7 332 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 CLEC4EQ9ULY5 219 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 WNT6Q9Y6F9 365 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 NUMA1Q14980 2115 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 ZFPL1O95159 310 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 F3P13726 295 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 TACR3P29371 465 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 APLNRP35414 380 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 SNRPD1P62314 119 aaKnown RBP16.74■□□□□ 0.27
RAB40C-206ENST00000561781 TMEM220Q6QAJ8 160 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 ZNF615Q8N8J6 731 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 OR51A7Q8NH64 312 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 C22orf15Q8WYQ4 148 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 SMARCD2Q92925 531 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 GAL3ST4Q96RP7 486 aa16.74■□□□□ 0.27
RAB40C-206ENST00000561781 VPS13AQ96RL7 3174 aa16.73■□□□□ 0.27
RAB40C-206ENST00000561781 MYO15AQ9UKN7 3530 aa16.73■□□□□ 0.27
RAB40C-206ENST00000561781 FEZF1A0PJY2 475 aa16.73■□□□□ 0.27
RAB40C-206ENST00000561781 ALOX12BO75342 701 aa16.73■□□□□ 0.27
RAB40C-206ENST00000561781 TXNDC12O95881 172 aa16.73■□□□□ 0.27
RAB40C-206ENST00000561781 CSTBP04080 98 aaKnown RBP16.73■□□□□ 0.27
RAB40C-206ENST00000561781 SLC35G4P0C7Q5 338 aa16.73■□□□□ 0.27
RAB40C-206ENST00000561781 NTSP30990 170 aa16.73■□□□□ 0.27
RAB40C-206ENST00000561781 EFNB2P52799 333 aa16.73■□□□□ 0.27
RAB40C-206ENST00000561781 NANOS3P60323 173 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms