RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	OR1F12	Q8NHA8	337 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	ITLN1	Q8WWA0	313 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	ZNRF4	Q8WWF5	429 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	CCL17	Q92583	94 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	CMBL	Q96DG6	245 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	ELMOD3	Q96FG2	381 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	NSMCE2	Q96MF7	247 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	SIGLEC11	Q96RL6	698 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	BTBD10	Q9BSF8	475 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	KRTAP4-2	Q9BYR5	136 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	PLA2G12A	Q9BZM1	189 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	EGLN3	Q9H6Z9	239 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	METTL17	Q9H7H0	456 aa	Predicted RBP	6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	ELOVL3	Q9HB03	270 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	RPRD1B	Q9NQG5	326 aa	Known RBP	6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	TBCCD1	Q9NVR7	557 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	VNN3	Q9NY84	501 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	PTTG3P	Q9NZH4	202 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	PURG	Q9UJV8	347 aa	Known RBP	6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	B9D1	Q9UPM9	204 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	ARL2BP	Q9Y2Y0	163 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	GRIP1	Q9Y3R0	1128 aa		6.25	□□□□□ -1.41
ZEB1-223	ENST00000561304	hCG_2014768	A0A024R1R8	64 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304		H0YL77	283 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	OR10H3	O60404	316 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	VENTX	O95231	258 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	PNP	P00491	289 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	IGHV2-70	P01814	119 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	MT-ND5	P03915	603 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	ADRA2C	P18825	462 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	GSTM3	P21266	225 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	SLC6A6	P31641	620 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	SRP14	P37108	136 aa	Known RBP	6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	RPS27	P42677	84 aa	Known RBP	6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	CENPA	P49450	140 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	SEC61A1	P61619	476 aa	Known RBP	6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	TNFAIP6	P98066	277 aa	Predicted RBP	6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	TEK	Q02763	1124 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	COX10	Q12887	443 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	KRT72	Q14CN4	511 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	MOG	Q16653	247 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	KRTAP27-1	Q3LI81	207 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	CLEC12A	Q5QGZ9	265 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	SLC35F1	Q5T1Q4	408 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	ZNF770	Q6IQ21	691 aa	Predicted RBP	6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	SLC18B1	Q6NT16	456 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	NAA40	Q86UY6	237 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	SEMA6D	Q8NFY4	1073 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	OR2Z1	Q8NG97	314 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	OR10AD1	Q8NGE0	317 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	OR4C15	Q8NGM1	316 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	OR10S1	Q8NGN2	331 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	IFT27	Q9BW83	186 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	NDEL1	Q9GZM8	345 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	WDR76	Q9H967	626 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	IL1RAP	Q9NPH3	570 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	PNRC2	Q9NPJ4	139 aa	Known RBP	6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	MRPL22	Q9NWU5	206 aa	Known RBP	6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	ZDHHC8	Q9ULC8	765 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	POLR1D	Q9Y2S0	133 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	LYVE1	Q9Y5Y7	322 aa		6.24	□□□□□ -1.41
ZEB1-223	ENST00000561304	TRRAP	Q9Y4A5	3859 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	TRAV20	A0A0B4J274	112 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	IGHV3-64D	A0A0J9YX35	117 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	ISPD	A4D126	451 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	C5orf63	A6NC05	138 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	BHLHE40	O14503	412 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	ARPC3	O15145	178 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	MLNR	O43193	412 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	TCF21	O43680	179 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	GMNN	O75496	209 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	DCTN3	O75935	186 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	SELE	P16581	610 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	ZFP36	P26651	326 aa	Known RBP	6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	CRABP1	P29762	137 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	PYCR1	P32322	319 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	GGT2	P36268	569 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	LIPA	P38571	399 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	MAGEA2	P43356	314 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	LCN2	P80188	198 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	MXRA7	P84157	204 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	HOXA4	Q00056	320 aa	Predicted RBP	6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	MS4A2	Q01362	244 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	TSPAN31	Q12999	210 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	ZMYND11	Q15326	602 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	ZNF362	Q5T0B9	420 aa	Predicted RBP	6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	OR2T2	Q6IF00	324 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	ACSM5	Q6NUN0	579 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	FAHD2B	Q6P2I3	314 aa	Predicted RBP	6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	C16orf89	Q6UX73	402 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	UNQ6126/PRO20091	Q6UXV3	157 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	ZBTB46	Q86UZ6	589 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	JAZF1	Q86VZ6	243 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	C1orf174	Q8IYL3	243 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	RFLNB	Q8N5W9	214 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	ZNF283	Q8N7M2	679 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	CYB561A3	Q8NBI2	242 aa		6.23	□□□□□ -1.41
ZEB1-223	ENST00000561304	BHLHE23	Q8NDY6	225 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms