RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TMEM269A0A1B0GVZ9 245 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 ACOD1A6NK06 481 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 SIAH2O43255 324 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 FAM20BO75063 409 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 ENTPD6O75354 484 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 ATP6V1G2O95670 118 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 SCG5P05408 212 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 IRF2P14316 349 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 RAC2P15153 192 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 TNFRSF1AP19438 455 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 CDKN1AP38936 164 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 DDOSTP39656 456 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 VHLP40337 213 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 RPS27P42677 84 aaKnown RBP9.24□□□□□ -0.93
TPM1-229ENST00000561242 ZNF81P51508 661 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 CXCR4P61073 352 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 SLC3A1Q07837 685 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 EFNB3Q15768 340 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 ADIPOQQ15848 244 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 AADACL4Q5VUY2 407 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 B3GLCTQ6Y288 498 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 CFAP77Q6ZQR2 320 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 FAM57BQ71RH2 274 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 ZNF679Q8IYX0 411 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 LRRC75A-AS1Q8N1F1 130 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 ACBD7Q8N6N7 88 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 BBS1Q8NFJ9 593 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 HAVCR2Q8TDQ0 301 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 MBD6Q96DN6 1003 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 DDOQ99489 341 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 FOXC2Q99958 501 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 TRAF4Q9BUZ4 470 aaPredicted RBP9.24□□□□□ -0.93
TPM1-229ENST00000561242 OR2J1Q9GZK6 312 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 RGCCQ9H4X1 137 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 INPP5EQ9NRR6 644 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 TMEM100Q9NV29 134 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 ZNF224Q9NZL3 707 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 GNG8Q9UK08 70 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 BLOC1S6Q9UL45 172 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 ZDHHC8Q9ULC8 765 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 KIAA1549Q9HCM3 1950 aa9.24□□□□□ -0.93
TPM1-229ENST00000561242 LOC100509620A0A075B734 347 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 ZNF503-AS2A6NEH8 195 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 EFCAB10A6NFE3 127 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 METTL15A6NJ78 407 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 ANXA2P2A6NMY6 339 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 LOC110117498-PIK3R3F6TDL0 507 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 M0R129 80 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 SSX4O60224 188 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 GPRIN2O60269 458 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 RPP14O95059 124 aaKnown RBP9.23□□□□□ -0.93
TPM1-229ENST00000561242 SERPINA3P01011 423 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 SBK2P0C263 348 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 ZNF12P17014 697 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 CD53P19397 219 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 EPHA2P29317 976 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 PPOXP50336 477 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 PDLIM4P50479 330 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 EFNA4P52798 201 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 GBX2P52951 348 aaPredicted RBP9.23□□□□□ -0.93
TPM1-229ENST00000561242 KRTAP10-9P60411 292 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 RAB40BQ12829 278 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 MRPL28Q13084 256 aaKnown RBP9.23□□□□□ -0.93
TPM1-229ENST00000561242 ALKBH6Q3KRA9 238 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 SLC25A30Q5SVS4 291 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 BCL2L15Q5TBC7 163 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 MBNL2Q5VZF2 373 aaKnown RBP9.23□□□□□ -0.93
TPM1-229ENST00000561242 USP51Q70EK9 711 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 ZNF584Q8IVC4 421 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 TIGD4Q8IY51 512 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 OR13G1Q8NGZ3 307 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 OR8S1Q8NH09 359 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 KLF14Q8TD94 323 aaPredicted RBP9.23□□□□□ -0.93
TPM1-229ENST00000561242 RNF133Q8WVZ7 376 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 SLC7A6Q92536 515 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 NRGNQ92686 78 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 MYDGFQ969H8 173 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 TIMD4Q96H15 378 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 MBOAT4Q96T53 435 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 DOK1Q99704 481 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 MOB1AQ9H8S9 216 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 MARCH7Q9H992 704 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 PLEKHA1Q9HB21 404 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 STARD10Q9Y365 291 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 TPRKBQ9Y3C4 175 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 BAHCC1Q9P281 2608 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 MED12LQ86YW9 2145 aa9.23□□□□□ -0.93
TPM1-229ENST00000561242 LRRC30A6NM36 301 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 SPRY3O43610 288 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 SOD3P08294 240 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 DBHP09172 617 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 ACSM4P0C7M7 580 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 ZNF250P15622 560 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 ALOX5APP20292 161 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 EEF1B2P24534 225 aaKnown RBP9.22□□□□□ -0.93
TPM1-229ENST00000561242 DCKP27707 260 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 ALDH3B1P43353 468 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 PTH2RP49190 550 aa9.22□□□□□ -0.93
TPM1-229ENST00000561242 SRP9P49458 86 aaKnown RBP9.22□□□□□ -0.93
TPM1-229ENST00000561242 HIST1H3AP68431 136 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms