RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 AKAP1Q92667 903 aaKnown RBP eCLIP10.43□□□□□ -0.74
IRF9-211ENST00000560852 NINJ1Q92982 152 aa10.43□□□□□ -0.74
IRF9-211ENST00000560852 FBXW5Q969U6 566 aa10.43□□□□□ -0.74
IRF9-211ENST00000560852 SPSB4Q96A44 273 aa10.43□□□□□ -0.74
IRF9-211ENST00000560852 APOBEC3DQ96AK3 386 aaPredicted RBP10.43□□□□□ -0.74
IRF9-211ENST00000560852 MBD6Q96DN6 1003 aa10.43□□□□□ -0.74
IRF9-211ENST00000560852 MARS2Q96GW9 593 aaKnown RBP10.43□□□□□ -0.74
IRF9-211ENST00000560852 SIGLEC11Q96RL6 698 aa10.43□□□□□ -0.74
IRF9-211ENST00000560852 MROQ9BYG7 248 aa10.43□□□□□ -0.74
IRF9-211ENST00000560852 YTHDF1Q9BYJ9 559 aaKnown RBP10.43□□□□□ -0.74
IRF9-211ENST00000560852 AASSQ9UDR5 926 aa10.43□□□□□ -0.74
IRF9-211ENST00000560852 ZNF391Q9UJN7 358 aa10.43□□□□□ -0.74
IRF9-211ENST00000560852 EDARQ9UNE0 448 aa10.43□□□□□ -0.74
IRF9-211ENST00000560852 DIMT1Q9UNQ2 313 aaKnown RBP10.43□□□□□ -0.74
IRF9-211ENST00000560852 UTP20O75691 2785 aaKnown RBP10.43□□□□□ -0.74
IRF9-211ENST00000560852 BAHCC1Q9P281 2608 aa10.43□□□□□ -0.74
IRF9-211ENST00000560852 CELSR2Q9HCU4 2923 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 TMEM129A0AVI4 362 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 PRR32B1ATL7 298 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 B9A039 149 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 M0R135 149 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 OVOL3O00110 214 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 NGFP01138 241 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 IGLV3-1P01715 115 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 IGHV3-13P01766 116 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 DBHP09172 617 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 THBS4P35443 961 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 ATP6V1E1P36543 226 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 GALK2Q01415 458 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 MRPL28Q13084 256 aaKnown RBP10.42□□□□□ -0.74
IRF9-211ENST00000560852 GALEQ14376 348 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 HIST2H2BCQ6DN03 193 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 C11orf71Q6IPW1 123 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 PLEKHG7Q6ZR37 379 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 OR52I1Q8NGK6 324 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 OR5L1Q8NGL2 311 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 SMAP2Q8WU79 429 aaPredicted RBP10.42□□□□□ -0.74
IRF9-211ENST00000560852 GGHQ92820 318 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 MRPL24Q96A35 216 aaKnown RBP10.42□□□□□ -0.74
IRF9-211ENST00000560852 RNF166Q96A37 237 aaPredicted RBP10.42□□□□□ -0.74
IRF9-211ENST00000560852 HAVCR1Q96D42 359 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 ZNF799Q96GE5 643 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 DOK1Q99704 481 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 PLK3Q9H4B4 646 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 RGCCQ9H4X1 137 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 Q9H521 79 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 OPA3Q9H6K4 179 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 FAIMQ9NVQ4 179 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 SLCO1C1Q9NYB5 712 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 MRM2Q9UI43 246 aaKnown RBP10.42□□□□□ -0.74
IRF9-211ENST00000560852 CMAHPQ9Y471 501 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 UNC79Q9P2D8 2635 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 DCHS2Q6V1P9 2916 aa10.42□□□□□ -0.74
IRF9-211ENST00000560852 NBPF19A0A087WUL8 3843 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 A0A0U1RQV5 110 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 TRIM64A6NGJ6 449 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 METTL15A6NJ78 407 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 MRPS14O60783 128 aaKnown RBP10.41□□□□□ -0.74
IRF9-211ENST00000560852 CD8AP01732 235 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 ADH4P08319 380 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 H2BFMP0C1H6 154 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 CCL2P13500 99 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 RAC2P15153 192 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 KITLGP21583 273 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 SERPINF1P36955 418 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 HCCSP53701 268 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 PSMA6P60900 246 aaKnown RBP10.41□□□□□ -0.74
IRF9-211ENST00000560852 ACTA2P62736 377 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 ACTG2P63267 376 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 SLC35A2P78381 396 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 SNTB2Q13425 540 aaKnown RBP10.41□□□□□ -0.74
IRF9-211ENST00000560852 MOGQ16653 247 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 MSMPQ1L6U9 139 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 AGAP6Q5VW22 663 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 ALKBH2Q6NS38 261 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.41□□□□□ -0.74
IRF9-211ENST00000560852 ZNF485Q8NCK3 441 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 SLC7A6Q92536 515 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 MRPL48Q96GC5 212 aaKnown RBP10.41□□□□□ -0.74
IRF9-211ENST00000560852 COPS4Q9BT78 406 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 TRAF4Q9BUZ4 470 aaPredicted RBP10.41□□□□□ -0.74
IRF9-211ENST00000560852 REPIN1Q9BWE0 567 aaKnown RBP10.41□□□□□ -0.74
IRF9-211ENST00000560852 CDCA4Q9BXL8 241 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 MOB1AQ9H8S9 216 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 AMBNQ9NP70 447 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 CENPMQ9NSP4 180 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 CBLN4Q9NTU7 201 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 ZNF701Q9NV72 531 aaPredicted RBP10.41□□□□□ -0.74
IRF9-211ENST00000560852 ERVK13-1Q9NX77 482 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 CGGBP1Q9UFW8 167 aaPredicted RBP10.41□□□□□ -0.74
IRF9-211ENST00000560852 MYRFQ9Y2G1 1151 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 STARD10Q9Y365 291 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 LRP12Q9Y561 859 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 ATP23Q9Y6H3 246 aa10.41□□□□□ -0.74
IRF9-211ENST00000560852 ABCA4P78363 2273 aa10.4□□□□□ -0.74
IRF9-211ENST00000560852 CADP27708 2225 aa10.4□□□□□ -0.74
IRF9-211ENST00000560852 F5H5K5 113 aa10.4□□□□□ -0.74
IRF9-211ENST00000560852 FAM20BO75063 409 aa10.4□□□□□ -0.74
IRF9-211ENST00000560852 RPSAP08865 295 aaKnown RBP10.4□□□□□ -0.74
IRF9-211ENST00000560852 MRPL3P09001 348 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms