RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 PPA1Q15181 289 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 C3orf36Q3SXR2 165 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 KCTD8Q6ZWB6 473 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 PRSS35Q8N3Z0 413 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 TMIGD2Q96BF3 282 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 KCNJ15Q99712 375 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 COQ7Q99807 217 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 ATF6BQ99941 703 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 CCDC90BQ9GZT6 254 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 KCNN2Q9H2S1 579 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 RNF121Q9H920 327 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 CENPMQ9NSP4 180 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 ACOXLQ9NUZ1 547 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 BABAM2Q9NXR7 383 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 FRRS1LQ9P0K9 344 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 ATPIF1Q9UII2 106 aa8.12□□□□□ -1.11
HERC1-206ENST00000559996 SF3B6Q9Y3B4 125 aaKnown RBP8.12□□□□□ -1.11
HERC1-206ENST00000559996 SPTBN1Q01082 2364 aaKnown RBP8.11□□□□□ -1.11
HERC1-206ENST00000559996 USP9XQ93008 2570 aaPredicted RBP8.11□□□□□ -1.11
HERC1-206ENST00000559996 J3QKU1 62 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 ICMTO60725 284 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 NGFP01138 241 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 IGLV3-1P01715 115 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 H2BFMP0C1H6 154 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 CECR9P0C854 216 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 VSIG8P0DPA2 414 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 STOMP27105 288 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 KIR3DL2P43630 455 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 CAPZA2P47755 286 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 PRKXP51817 358 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 UBE2NP61088 152 aaKnown RBP8.11□□□□□ -1.11
HERC1-206ENST00000559996 SPHARQ15513 63 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 SSX1Q16384 188 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 SYT6Q5T7P8 510 aaPredicted RBP8.11□□□□□ -1.11
HERC1-206ENST00000559996 TMEM53Q6P2H8 277 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 KCTD18Q6PI47 426 aaPredicted RBP8.11□□□□□ -1.11
HERC1-206ENST00000559996 KRT77Q7Z794 578 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 CATSPERDQ86XM0 798 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 KLBQ86Z14 1044 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 KLHL36Q8N4N3 616 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 YIPF7Q8N8F6 280 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 SNX33Q8WV41 574 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 NANOS1Q8WY41 292 aaKnown RBP8.11□□□□□ -1.11
HERC1-206ENST00000559996 MUL1Q969V5 352 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 PGLYRP3Q96LB9 341 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 COG8Q96MW5 612 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 OPALINQ96PE5 141 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 SOX7Q9BT81 388 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 C1QTNF5Q9BXJ0 243 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 MROQ9BYG7 248 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 HDHD2Q9H0R4 259 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 ISYNA1Q9NPH2 558 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 GNG8Q9UK08 70 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 SLC22A13Q9Y226 551 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 ERGIC3Q9Y282 383 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 POLR1DQ9Y2S0 133 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 CADP27708 2225 aa8.11□□□□□ -1.11
HERC1-206ENST00000559996 IGHV2OR16-5A0A0B4J2B6 119 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 OR4C45A6NMZ5 311 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 F5H5K5 113 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 M0R135 149 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 PLPP2O43688 288 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 RPP14O95059 124 aaKnown RBP8.1□□□□□ -1.11
HERC1-206ENST00000559996 CLDN1O95832 211 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 MT-ND5P03915 603 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 KRT8P05787 483 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 EPXP11678 715 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 ATP6V1B1P15313 513 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 PPP3CBP16298 524 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 MYL12AP19105 171 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 PAX7P23759 505 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 LIPAP38571 399 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 HTR5AP47898 357 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 TGM4P49221 684 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 ZNF83P51522 516 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 IDH3GP51553 393 aaPredicted RBP8.1□□□□□ -1.11
HERC1-206ENST00000559996 RIDAP52758 137 aaKnown RBP8.1□□□□□ -1.11
HERC1-206ENST00000559996 ZNF121P58317 390 aaPredicted RBP8.1□□□□□ -1.11
HERC1-206ENST00000559996 RPS11P62280 158 aaKnown RBP eCLIP8.1□□□□□ -1.11
HERC1-206ENST00000559996 ACTA2P62736 377 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 GRB2P62993 217 aaKnown RBP8.1□□□□□ -1.11
HERC1-206ENST00000559996 ACTG2P63267 376 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 GALK2Q01415 458 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 BDH1Q02338 343 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 ECH1Q13011 328 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 TNK1Q13470 666 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 TPBGQ13641 420 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 ALKBH1Q13686 389 aaKnown RBP8.1□□□□□ -1.11
HERC1-206ENST00000559996 MSMPQ1L6U9 139 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 SNAI3Q3KNW1 292 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 TMEM255AQ5JRV8 349 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 WDR38Q5JTN6 314 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 DMKNQ6E0U4 476 aaPredicted RBP8.1□□□□□ -1.11
HERC1-206ENST00000559996 TMPRSS11AQ6ZMR5 421 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 Q6ZSR3 168 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 DMRTC2Q8IXT2 367 aaPredicted RBP8.1□□□□□ -1.11
HERC1-206ENST00000559996 ZNF101Q8IZC7 436 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 LINC00528Q8N1L1 170 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 ZFP41Q8N8Y5 198 aa8.1□□□□□ -1.11
HERC1-206ENST00000559996 SLC30A7Q8NEW0 376 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms