RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 LCKP06239 509 aa18.64■□□□□ 0.57
SNX1-206ENST00000559389 HSD11B1P28845 292 aa18.64■□□□□ 0.57
SNX1-206ENST00000559389 PRKXP51817 358 aa18.64■□□□□ 0.57
SNX1-206ENST00000559389 CDK5R2Q13319 367 aa18.64■□□□□ 0.57
SNX1-206ENST00000559389 EFNB3Q15768 340 aa18.64■□□□□ 0.57
SNX1-206ENST00000559389 SNCBQ16143 134 aa18.64■□□□□ 0.57
SNX1-206ENST00000559389 LAIR2Q6ISS4 152 aa18.64■□□□□ 0.57
SNX1-206ENST00000559389 ZNF322Q6U7Q0 402 aaPredicted RBP18.64■□□□□ 0.57
SNX1-206ENST00000559389 SSX6Q7RTT6 188 aa18.64■□□□□ 0.57
SNX1-206ENST00000559389 TBX5Q99593 518 aa18.64■□□□□ 0.57
SNX1-206ENST00000559389 DOK1Q99704 481 aa18.64■□□□□ 0.57
SNX1-206ENST00000559389 CCL19Q99731 98 aa18.64■□□□□ 0.57
SNX1-206ENST00000559389 TRAF4Q9BUZ4 470 aaPredicted RBP18.64■□□□□ 0.57
SNX1-206ENST00000559389 C1QTNF5Q9BXJ0 243 aa18.64■□□□□ 0.57
SNX1-206ENST00000559389 RASSF4Q9H2L5 321 aa18.64■□□□□ 0.57
SNX1-206ENST00000559389 MRPS18AQ9NVS2 196 aaKnown RBP18.64■□□□□ 0.57
SNX1-206ENST00000559389 SLCO1C1Q9NYB5 712 aa18.64■□□□□ 0.57
SNX1-206ENST00000559389 LRP12Q9Y561 859 aa18.64■□□□□ 0.57
SNX1-206ENST00000559389 A0A1W2PQL4 384 aaPredicted RBP18.63■□□□□ 0.57
SNX1-206ENST00000559389 H3BSA7 217 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 CD53P19397 219 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 MYF6P23409 242 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 SERPINF1P36955 418 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 SLC6A9P48067 706 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 CX3CR1P49238 355 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 PSMA6P60900 246 aaKnown RBP18.63■□□□□ 0.57
SNX1-206ENST00000559389 EGR3Q06889 387 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 RAB40BQ12829 278 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 SPATA46Q5T0L3 261 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 AGAP6Q5VW22 663 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 C11orf71Q6IPW1 123 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 DEGS2Q6QHC5 323 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 KRT77Q7Z794 578 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 ZNF283Q8N7M2 679 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 SLC25A40Q8TBP6 338 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 MARS2Q96GW9 593 aaKnown RBP18.63■□□□□ 0.57
SNX1-206ENST00000559389 COG8Q96MW5 612 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 ZNF184Q99676 751 aaPredicted RBP18.63■□□□□ 0.57
SNX1-206ENST00000559389 MRPL37Q9BZE1 423 aaKnown RBP18.63■□□□□ 0.57
SNX1-206ENST00000559389 POFUT1Q9H488 388 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 NIPAL2Q9H841 368 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 CBLN4Q9NTU7 201 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 PLEKHA6Q9Y2H5 1048 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 PCDHGB1Q9Y5G3 927 aa18.63■□□□□ 0.57
SNX1-206ENST00000559389 CRYBG3Q68DQ2 2970 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 VSTM5A8MXK1 200 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 PSMD9O00233 223 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 CD8AP01732 235 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 ZNF250P15622 560 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 TUBG1P23258 451 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 ANOS1P23352 680 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 ZNF85Q03923 595 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 MST1LQ2TV78 715 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 CDH24Q86UP0 819 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 NAA40Q86UY6 237 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 ZNF679Q8IYX0 411 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 OR2J1Q9GZK6 312 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 PLK3Q9H4B4 646 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 TUBG2Q9NRH3 451 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 IKZF2Q9UKS7 526 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 RAB26Q9ULW5 256 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 FZR1Q9UM11 496 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 EDARQ9UNE0 448 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 LAMP3Q9UQV4 416 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 STARD10Q9Y365 291 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 PLCE1Q9P212 2302 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 DCHS2Q6V1P9 2916 aa18.62■□□□□ 0.57
SNX1-206ENST00000559389 IGLV3-9A0A075B6K5 115 aa18.61■□□□□ 0.57
SNX1-206ENST00000559389 B9A039 149 aa18.61■□□□□ 0.57
SNX1-206ENST00000559389 ZNF254O75437 659 aa18.61■□□□□ 0.57
SNX1-206ENST00000559389 IGHA1P01876 353 aa18.61■□□□□ 0.57
SNX1-206ENST00000559389 APOC1P02654 83 aa18.61■□□□□ 0.57
SNX1-206ENST00000559389 LCATP04180 440 aa18.61■□□□□ 0.57
SNX1-206ENST00000559389 ZNF121P58317 390 aaPredicted RBP18.61■□□□□ 0.57
SNX1-206ENST00000559389 SWI5Q1ZZU3 235 aa18.61■□□□□ 0.57
SNX1-206ENST00000559389 SNAI3Q3KNW1 292 aa18.61■□□□□ 0.57
SNX1-206ENST00000559389 ZNF684Q5T5D7 378 aa18.61■□□□□ 0.57
SNX1-206ENST00000559389 MBNL2Q5VZF2 373 aaKnown RBP18.61■□□□□ 0.57
SNX1-206ENST00000559389 PRSS45Q7RTY3 260 aa18.61■□□□□ 0.57
SNX1-206ENST00000559389 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.61■□□□□ 0.57
SNX1-206ENST00000559389 OR52I1Q8NGK6 324 aa18.61■□□□□ 0.57
SNX1-206ENST00000559389 KLF14Q8TD94 323 aaPredicted RBP18.61■□□□□ 0.57
SNX1-206ENST00000559389 NINJ1Q92982 152 aa18.61■□□□□ 0.57
SNX1-206ENST00000559389 SYT3Q9BQG1 590 aa18.61■□□□□ 0.57
SNX1-206ENST00000559389 MROQ9BYG7 248 aa18.61■□□□□ 0.57
SNX1-206ENST00000559389 MRM2Q9UI43 246 aaKnown RBP18.61■□□□□ 0.57
SNX1-206ENST00000559389 CELSR2Q9HCU4 2923 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 CACNA1DQ01668 2161 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 TMEM129A0AVI4 362 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 FADS2O95864 444 aaKnown RBP18.6■□□□□ 0.57
SNX1-206ENST00000559389 SLC2A1P11166 492 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 DCTDP32321 178 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 MPV17P39210 176 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 EVX1P49640 407 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 RIDAP52758 137 aaKnown RBP18.6■□□□□ 0.57
SNX1-206ENST00000559389 ZNF718Q3SXZ3 478 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 KLHL22Q53GT1 634 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 TMEM255AQ5JRV8 349 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 LRP11Q86VZ4 500 aa18.6■□□□□ 0.57
SNX1-206ENST00000559389 ACBD7Q8N6N7 88 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms