RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 MFSD13AQ14CX5 517 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 TMEM176BQ3YBM2 270 aaPredicted RBP9.07□□□□□ -0.96
TPM1-212ENST00000558347 CCDC58Q4VC31 144 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 ACSM3Q53FZ2 586 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 PLA1AQ53H76 456 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 PDSS1Q5T2R2 415 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 FAM69AQ5T7M9 428 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 C3orf33Q6P1S2 294 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 NR2C2APQ86WQ0 139 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 LSRQ86X29 649 aaPredicted RBP9.07□□□□□ -0.96
TPM1-212ENST00000558347 YIPF7Q8N8F6 280 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 OR4M2Q8NGB6 313 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 OR6K3Q8NGY3 331 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 TRMT10AQ8TBZ6 339 aaKnown RBP9.07□□□□□ -0.96
TPM1-212ENST00000558347 HAVCR2Q8TDQ0 301 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 TAAR8Q969N4 342 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 UPRTQ96BW1 309 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 FYTTD1Q96QD9 318 aaKnown RBP9.07□□□□□ -0.96
TPM1-212ENST00000558347 CNN2Q99439 309 aaKnown RBP9.07□□□□□ -0.96
TPM1-212ENST00000558347 TBX5Q99593 518 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 THAP7Q9BT49 309 aaPredicted RBP9.07□□□□□ -0.96
TPM1-212ENST00000558347 OR51V1Q9H2C8 321 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 CXXC4Q9H2H0 198 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 FKRPQ9H9S5 495 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 NANSQ9NR45 359 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 PLSCR4Q9NRQ2 329 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 ELOVL5Q9NYP7 299 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 PTTG3PQ9NZH4 202 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 COPZ2Q9P299 210 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 RASD1Q9Y272 281 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 HIF3AQ9Y2N7 669 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 EMC9Q9Y3B6 208 aa9.07□□□□□ -0.96
TPM1-212ENST00000558347 TRAV27A0A087WT01 109 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 C7orf66A4D0T2 115 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 DEFB108AA8MXU0 73 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 FTCDNL1E5RQL4 147 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 LRRN3E7EW58 273 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 E9PI62 339 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 C16orf97H3BN30 126 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 CTDSPLO15194 276 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 GSTZ1O43708 216 aaPredicted RBP9.06□□□□□ -0.96
TPM1-212ENST00000558347 GPRIN2O60269 458 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 UBL3O95164 117 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 GOSR1O95249 250 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 AHSA1O95433 338 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 DHFRP00374 187 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 EIF4EP06730 217 aaKnown RBP9.06□□□□□ -0.96
TPM1-212ENST00000558347 UCHL1P09936 223 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 NOS3P29474 1203 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 AGTR1P30556 359 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 MMP15P51511 669 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 PRPS1P60891 318 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 SLC3A1Q07837 685 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 MRPL28Q13084 256 aaKnown RBP9.06□□□□□ -0.96
TPM1-212ENST00000558347 CDK5R1Q15078 307 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 CDONQ4KMG0 1287 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 RPL22L1Q6P5R6 122 aaKnown RBP9.06□□□□□ -0.96
TPM1-212ENST00000558347 DPY19L2P2Q6ZN68 376 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 LRRC17Q8N6Y2 441 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 SAMD12Q8N8I0 201 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 MFSD8Q8NHS3 518 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 RPS4Y2Q8TD47 263 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 RNF128Q8TEB7 428 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 ABHD3Q8WU67 409 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 CPNE4Q96A23 557 aaPredicted RBP9.06□□□□□ -0.96
TPM1-212ENST00000558347 SMIM19Q96E16 107 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 MOGAT1Q96PD6 335 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 TNFRSF13CQ96RJ3 184 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 GPX7Q96SL4 187 aaPredicted RBP9.06□□□□□ -0.96
TPM1-212ENST00000558347 FOXC2Q99958 501 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 OR11A1Q9GZK7 315 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 C12orf49Q9H741 205 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 MARCH7Q9H992 704 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 GLRX2Q9NS18 164 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 NUBP2Q9Y5Y2 271 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 CACNG2Q9Y698 323 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 MED13LQ71F56 2210 aa9.06□□□□□ -0.96
TPM1-212ENST00000558347 A0A1W2PNR3 127 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 ANKRD34BA5PLL1 514 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 ARPC3O15145 178 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 CRYGSP22914 178 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 DNASE1P24855 282 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 DIO1P49895 249 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 SLC16A1P53985 500 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 OR12D2P58182 307 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 UNQ9370/PRO34162Q6UXP9 181 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 STAC2Q6ZMT1 411 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 CREB3L2Q70SY1 520 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 ZNF767PQ75MW2 155 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 FCRLAQ7L513 359 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 SLC35F2Q8IXU6 374 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 C10orf53Q8N6V4 93 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 LRRC75AQ8NAA5 344 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 OR51A7Q8NH64 312 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 GHSRQ92847 366 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 ERMAPQ96PL5 475 aaPredicted RBP9.05□□□□□ -0.96
TPM1-212ENST00000558347 MRI1Q9BV20 369 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 NDEL1Q9GZM8 345 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 DPAGT1Q9H3H5 408 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 EMC7Q9NPA0 242 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms