RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 TMPRSS9Q7Z410 1059 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 WDR5BQ86VZ2 330 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 LINC00346Q8IVM7 164 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 ELMOD2Q8IZ81 293 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 GABRG1Q8N1C3 465 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 KDM8Q8N371 416 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 SLC22A24Q8N4F4 322 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 FADS6Q8N9I5 356 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 SLC38A9Q8NBW4 561 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 CLEC1AQ8NC01 280 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 ZBTB34Q8NCN2 500 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 OR6X1Q8NH79 312 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 FAM46BQ96A09 425 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 OXGR1Q96P68 337 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 PRO3102Q9H379 93 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 EXO5Q9H790 373 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 TMEM138Q9NPI0 162 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 CENPMQ9NSP4 180 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 FAM206AQ9NX38 181 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 MED29Q9NX70 200 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 CYB5R1Q9UHQ9 305 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 PCDHGA5Q9Y5G8 931 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 LOC102723996A0A087X1L8 192 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 TRAV20A0A0B4J274 112 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 LY6G6EA0A0G2JKS1 128 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 A0A1W2PPL8 197 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 OR2M5A3KFT3 312 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 HMSDA8MTL9 139 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 B4E171 279 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 DISC1C4P0D8 188 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 C9J4A7 227 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 F5H5P2 479 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 L7N2F9 121 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 MEN1O00255 615 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 P2RY10O00398 339 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 SYT7O43581 403 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 DOK2O60496 412 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 RAD1O60671 282 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 ZNF354AO60765 605 aaPredicted RBP6.47□□□□□ -1.37
VPS13C-206ENST00000558338 OR2J2O76002 312 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 KDM4BO94953 1096 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 MPZL1O95297 269 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 RAB3DO95716 219 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 RLN1P04808 185 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 ITGB2P05107 769 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 ACSM4P0C7M7 580 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 PGA4P0DJD7 388 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 PGA3P0DJD8 388 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 PTHLHP12272 177 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 ZNF20P17024 532 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 ZNF24P17028 368 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 TBPP20226 339 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 RAB3AP20336 220 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 OR3A3P47888 321 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 GRB2P62993 217 aaKnown RBP6.47□□□□□ -1.37
VPS13C-206ENST00000558338 SLC35A1P78382 337 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 PMPCAQ10713 525 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 PLA2G7Q13093 441 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 KCNMB1Q16558 191 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 FAAP20Q6NZ36 180 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 LPCAT3Q6P1A2 487 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 MRPL14Q6P1L8 145 aaKnown RBP6.47□□□□□ -1.37
VPS13C-206ENST00000558338 OPN5Q6U736 354 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 MDGA2Q7Z553 956 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 ZNF584Q8IVC4 421 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 ABCA7Q8IZY2 2146 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 OR8H3Q8N146 312 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 OR1M1Q8NGA1 313 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 OR10G3Q8NGC4 313 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 OR5D14Q8NGL3 314 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 POC1BQ8TC44 478 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 TNFAIP8L1Q8WVP5 186 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 PNPLA2Q96AD5 504 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 RASL10BQ96S79 203 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 MRPL13Q9BYD1 178 aaKnown RBP6.47□□□□□ -1.37
VPS13C-206ENST00000558338 CHIAQ9BZP6 476 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 PBOV1Q9GZY1 135 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 HEXA-AS1Q9H8Q6 139 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 B3GAT1Q9P2W7 334 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 FBLN5Q9UBX5 448 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 PILRBQ9UKJ0 227 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 AUP1Q9Y679 476 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 U3KQA8 63 aa6.47□□□□□ -1.37
VPS13C-206ENST00000558338 RP1P56715 2156 aa6.46□□□□□ -1.38
VPS13C-206ENST00000558338 UNC13CQ8NB66 2214 aa6.46□□□□□ -1.38
VPS13C-206ENST00000558338 TMEM82A0PJX8 343 aa6.46□□□□□ -1.38
VPS13C-206ENST00000558338 DCDC2BA2VCK2 349 aa6.46□□□□□ -1.38
VPS13C-206ENST00000558338 AQP7P3A6NL99 342 aa6.46□□□□□ -1.38
VPS13C-206ENST00000558338 ZNF726A6NNF4 738 aa6.46□□□□□ -1.38
VPS13C-206ENST00000558338 ZNF891A8MT65 544 aaPredicted RBP6.46□□□□□ -1.38
VPS13C-206ENST00000558338 ZNF736B4DX44 427 aaPredicted RBP6.46□□□□□ -1.38
VPS13C-206ENST00000558338 G3V3Q6 166 aa6.46□□□□□ -1.38
VPS13C-206ENST00000558338 TRAF3IP2O43734 574 aaPredicted RBP6.46□□□□□ -1.38
VPS13C-206ENST00000558338 CD74P04233 296 aa6.46□□□□□ -1.38
VPS13C-206ENST00000558338 CD3DP04234 171 aa6.46□□□□□ -1.38
VPS13C-206ENST00000558338 KLK3P07288 261 aaPredicted RBP6.46□□□□□ -1.38
VPS13C-206ENST00000558338 DCNP07585 359 aaKnown RBP6.46□□□□□ -1.38
VPS13C-206ENST00000558338 ZNF43P17038 809 aa6.46□□□□□ -1.38
VPS13C-206ENST00000558338 MPZP25189 248 aa6.46□□□□□ -1.38
VPS13C-206ENST00000558338 SPOCK1Q08629 439 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms