RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 ZNF665Q9H7R5 613 aa8.57□□□□□ -1.04
USP3-207ENST00000558218 HIF1ANQ9NWT6 349 aa8.57□□□□□ -1.04
USP3-207ENST00000558218 CYB5R1Q9UHQ9 305 aa8.57□□□□□ -1.04
USP3-207ENST00000558218 POLR1DQ9Y2S0 133 aa8.57□□□□□ -1.04
USP3-207ENST00000558218 WIPI2Q9Y4P8 454 aa8.57□□□□□ -1.04
USP3-207ENST00000558218 LYVE1Q9Y5Y7 322 aa8.57□□□□□ -1.04
USP3-207ENST00000558218 LHFPL6Q9Y693 200 aa8.57□□□□□ -1.04
USP3-207ENST00000558218 CDH10Q9Y6N8 788 aa8.57□□□□□ -1.04
USP3-207ENST00000558218 V9GYQ6 96 aa8.57□□□□□ -1.04
USP3-207ENST00000558218 PPIAL4EA0A075B759 164 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 PPIAL4CA0A0B4J2A2 164 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 OR6C68A6NDL8 312 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 FAM157AC9JC47 383 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 PPIAL4DF5H284 164 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 DCTN6O00399 190 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 DYNC1I1O14576 645 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 WNT9BO14905 357 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 CCNB2O95067 398 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 ALX3O95076 343 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 PPIAL4FP0DN26 164 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 SELEP16581 610 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 GGT2P36268 569 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 SRP14P37108 136 aaKnown RBP8.56□□□□□ -1.04
USP3-207ENST00000558218 BLVRAP53004 296 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 MVKQ03426 396 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 TRAP1Q12931 704 aaKnown RBP8.56□□□□□ -1.04
USP3-207ENST00000558218 TMEM255AQ5JRV8 349 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 OR2T5Q6IEZ7 315 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 ZNF770Q6IQ21 691 aaPredicted RBP8.56□□□□□ -1.04
USP3-207ENST00000558218 CD300LDQ6UXZ3 194 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 LNX2Q8N448 690 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 ZNF283Q8N7M2 679 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 OR8G5Q8NG78 346 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 OR52E2Q8NGJ4 325 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 OR4C15Q8NGM1 316 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 OR13G1Q8NGZ3 307 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 OR2T4Q8NH00 348 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 OR2T29Q8NH02 315 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 ASB9Q96DX5 294 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 ZNF582Q96NG8 517 aaPredicted RBP8.56□□□□□ -1.04
USP3-207ENST00000558218 TSSK2Q96PF2 358 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 C1QTNF5Q9BXJ0 243 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 MSL2Q9HCI7 577 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 RPRD1BQ9NQG5 326 aaKnown RBP8.56□□□□□ -1.04
USP3-207ENST00000558218 NPTNQ9Y639 398 aa8.56□□□□□ -1.04
USP3-207ENST00000558218 FBN1P35555 2871 aaKnown RBP8.55□□□□□ -1.04
USP3-207ENST00000558218 A0A1B0GWJ7 208 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 TCRBV5S2A0A599 114 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 BHLHE40O14503 412 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 TCF21O43680 179 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 PLPP2O43688 288 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 GASTP01350 101 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 IGHV2-5P01817 119 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 T-ENOLP0DO92 83 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 ZNF823P16415 610 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.55□□□□□ -1.04
USP3-207ENST00000558218 MICAQ29983 383 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 RSPO1Q2MKA7 263 aaPredicted RBP8.55□□□□□ -1.04
USP3-207ENST00000558218 TMEM155Q4W5P6 130 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 ZNF362Q5T0B9 420 aaPredicted RBP8.55□□□□□ -1.04
USP3-207ENST00000558218 SLC18B1Q6NT16 456 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 CYP2R1Q6VVX0 501 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 LRRC28Q86X40 367 aaPredicted RBP8.55□□□□□ -1.04
USP3-207ENST00000558218 OR2Z1Q8NG97 314 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 GTF3AQ92664 365 aaKnown RBP8.55□□□□□ -1.04
USP3-207ENST00000558218 PITX2Q99697 317 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 ATF6BQ99941 703 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 HCAR1Q9BXC0 346 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 DGCR6LQ9BY27 220 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 REEP1Q9H902 201 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 G6PC2Q9NQR9 355 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 TMEM106BQ9NUM4 274 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 TAS2R1Q9NYW7 299 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 POLR3KQ9Y2Y1 108 aaPredicted RBP8.55□□□□□ -1.04
USP3-207ENST00000558218 MXRA5Q9NR99 2828 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 DYSFO75923 2080 aa8.55□□□□□ -1.04
USP3-207ENST00000558218 TANC2Q9HCD6 1990 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 A0A0G2JMP0 313 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 A0A0X1KG70 313 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 ARRDC5A6NEK1 342 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 AQP12BA6NM10 295 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 IQCF6A8MYZ5 107 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 FOXH1O75593 365 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 PNPP00491 289 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 HLA-DQA2P01906 255 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 RAP2AP10114 183 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 ATP6V1B2P21281 511 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 SRP9P49458 86 aaKnown RBP8.54□□□□□ -1.04
USP3-207ENST00000558218 SLC25A1P53007 311 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 TPTEP56180 551 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 MS4A2Q01362 244 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 MALLQ13021 153 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 PCK2Q16822 640 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 ZNF181Q2M3W8 571 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 TEX30Q5JUR7 227 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 AVPI1Q5T686 147 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 FAHD2BQ6P2I3 314 aaPredicted RBP8.54□□□□□ -1.04
USP3-207ENST00000558218 Q6ZR03 302 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 RHOUQ7L0Q8 258 aa8.54□□□□□ -1.04
USP3-207ENST00000558218 AQP12AQ8IXF9 295 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms